Pre_GI: BLASTP Hits

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Query: NC_004631:2842453:2859938 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2859938, End: 2861569, Length: 1632

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2856596:2874081287408128757121632Salmonella enterica subsp. enterica serovar Typhi str. CT18,tyrosine phosphatase (associated with virulence)01130
NC_011147:2814664:2832153283215328337841632Salmonella enterica subsp. enterica serovar Paratyphi A strstpA-like protein01120
NC_006511:2819128:2836617283661728382481632Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCstpA-like protein01119
NC_003197:3005842:3022071302207130237021632Salmonella typhimurium LT2, complete genomeprotein tyrosine phosphatase/GTPase activating protein01068
NC_016810:3028421:3044647304464730462781632Salmonella enterica subsp. enterica serovar Typhimurium strtyrosine phosphatase (associated with virulence)01068
NC_016856:3026426:3042308304230830439391632Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sprotein tyrosine phosphatase/GTPase activating protein01068
NC_016857:3028421:3044647304464730462781632Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74protein tyrosine phosphatase/GTPase activating protein01068
NC_016860:3029272:3045501304550130471321632Salmonella enterica subsp. enterica serovar Typhimurium strprotein tyrosine phosphatase/GTPase activating protein01068
NC_016863:2974333:2990561299056129921921632Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1protein tyrosine phosphatase/GTPase activating protein01068
NC_017046:3027161:3043387304338730450181632Salmonella enterica subsp. enterica serovar Typhimurium str. 798tyrosine phosphatase (associated with virulence)01068
NC_011294:2890500:2906731290673129083621632Salmonella enterica subsp. enterica serovar Enteritidis strtyrosine phosphatase01066
NC_011274:2881306:2897535289753528991661632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91tyrosine phosphatase01066
NC_006905:2960260:2975599297559929772301632Salmonella enterica subsp. enterica serovar Choleraesuis strprotein tyrosine phosphate01065
NC_011094:2913500:2929276292927629308831608Salmonella enterica subsp. enterica serovar Schwarzengrund streffector protein SptP01053
NC_011080:2982346:2998575299857530001821608Salmonella enterica subsp. enterica serovar Newport str. SL254,effector protein SptP01051
NC_016831:2867766:2883994288399428856011608Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtyrosine phosphatase (associated with virulence)01051
NC_011205:3050235:3066468306646830680751608Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853effector protein SptP01051
NC_010102:2967464:2985053298505329866601608Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01050
NC_011149:2912219:2930597293059729322041608Salmonella enterica subsp. enterica serovar Agona str. SL483,effector protein SptP01044
NC_012125:2938519:2955982295598229575501569Salmonella enterica subsp. enterica serovar Paratyphi C straintyrosine phosphatase01027
NC_010067:84093:913009130092142843Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-96353
NC_015761:2726000:274232927423292743249921Salmonella bongori NCTC 12419, complete genome1e-87324
NC_009350:137645:7609760990001392Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative protein-tyrosine phosphatase Aop effector AopH8e-1892.4
NC_009350:6987:7609760990001392Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative protein-tyrosine phosphatase Aop effector AopH8e-1892.4