Pre_GI: BLASTP Hits

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Query: NC_004631:1271500:1274753 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1274753, End: 1275511, Length: 759

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1573470:158695215869521587710759Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protein2e-147521
NC_003198:1693623:170561917056191706377759Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative outer membrane protein2e-147521
NC_006511:1579776:159177115917711592529759Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative outer membrane protein2e-147521
NC_003197:1401603:140631114063111407069759Salmonella typhimurium LT2, complete genomeputative outer membrane protein7e-147519
NC_010102:1703172:171516617151661715924759Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-147519
NC_011294:1810285:182226818222681823026759Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane protein7e-147519
NC_016810:1358456:136316413631641363922759Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein7e-147519
NC_016856:1411579:141628714162871417045759Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein7e-147519
NC_016857:1358456:136316413631641363922759Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein7e-147519
NC_016863:1359769:136447713644771365235759Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein7e-147519
NC_011274:1850086:186207918620791862837759Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-146517
NC_016832:1269018:127375912737591274484726Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-140498
NC_011083:1408202:141138814113881412113726Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative outer membrane protein5e-140496
NC_016831:1166868:117160811716081172333726Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative outer membrane protein5e-140496
NC_016860:1399290:140403114040311404756726Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein5e-140496
NC_017046:1358531:136327213632721363997726Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane protein5e-140496
NC_011205:1938574:195055719505571951282726Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer membrane protein4e-139493
NC_020063:2011019:201794620179462018704759Enterobacteriaceae bacterium strain FGI 57, complete genomeputative salt-induced outer membrane protein8e-127452
NC_013850:2103469:213840521384052139163759Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF4814e-122437
NC_011283:2185462:220499622049962205754759Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-122437
NC_010159:3033989:304932930493293050018690Yersinia pestis Angola, complete genomehypothetical protein5e-64244
NC_009654:1729159:175172717517271752482756Marinomonas sp. MWYL1, complete genomehypothetical protein1e-1376.6
NC_011901:2914000:293037629303762931113738Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein3e-1065.9
NC_012440:1215838:121817612181761218898723Persephonella marina EX-H1, complete genomehypothetical protein2e-0963.2
NC_010995:1648897:165036416503641651143780Cellvibrio japonicus Ueda107, complete genomeputative outer membrane protein2e-0962.8