Pre_GI: BLASTP Hits

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Query: NC_004603:1961432:1968929 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 1968929, End: 1969204, Length: 276

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007274:72979:824248242482672249Pseudomonas syringae pv. phaseolicola 1448A large plasmid, completeprevent-host-death family protein7e-2199
NC_007005:5500196:550902755090275509275249Pseudomonas syringae pv. syringae B728a, complete genomePrevent-host-death protein2e-2097.8
NC_009708:2537557:254614625461462546373228Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeprevent-host-death family protein7e-1992.4
NC_020181:5384015:539857453985745398807234Enterobacter aerogenes EA1509E, complete genomePrevent-host-death family protein3e-1683.6
NC_013282:3216226:322337132233713223604234Cronobacter turicensis, complete genomehypothetical protein3e-1580.5
NC_003134:64672:704637046370690228Yersinia pestis CO92 plasmid pMT1, complete sequencehypothetical protein7e-1579.3
NC_008120:62000:850048500485231228Yersinia pestis Antiqua plasmid pMT, complete sequencehypothetical protein7e-1579.3
NC_008118:56777:894498944989676228Yersinia pestis Nepal516 plasmid pMT, complete sequencehypothetical protein7e-1579.3
NC_009378:106193:125541125541125768228Yersinia pestis Pestoides F plasmid MT, complete sequencehypothetical protein7e-1579.3
NC_005815:61148:951709517095415246Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completehypothetical protein7e-1579.3
NC_004838:51013:613076130761552246Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein7e-1579.3
NC_010158:92819:103101103101103328228Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceaddiction module antitoxin, Axe family7e-1579.3