Pre_GI: BLASTP Hits

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Query: NC_004578:6138669:6156615 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6156615, End: 6157343, Length: 729

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:110633:124956124956125687732Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeprotein phosphatase 2C domain-containing protein5e-88323
NC_009439:101174:104713104713105441729Pseudomonas mendocina ymp, complete genomeprotein phosphatase 2C domain-containing protein1e-85315
NC_020829:809457:824097824097824825729Pseudomonas denitrificans ATCC 13867, complete genomeserine/threonine phosphoprotein phosphatase Stp16e-81300
NC_013960:841181:843179843179843958780Nitrosococcus halophilus Nc4 chromosome, complete genomePhosphoprotein phosphatase3e-51201
NC_007973:2773427:278623227862322787002771Ralstonia metallidurans CH34 chromosome 1, complete sequenceprotein serine/threonine phosphatases6e-45180
NC_007645:4423507:443916944391694439894726Hahella chejuensis KCTC 2396, complete genomeSerine/threonine protein phosphatase7e-37154
NC_018000:3009864:301072930107293011499771Sinorhizobium fredii USDA 257 chromosome, complete genomeprotein phosphatase PrpC3e-36152
NC_004605:1092476:109359410935941094382789Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeprobable phosphoprotein phosphatase3e-35148
NC_014166:1751906:175190617519061752583678Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeprotein serine/threonine phosphatase5e-30131
NC_007508:1221500:122603712260371226741705Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeserine/threonine specific protein phosphatase1e-29130
NC_014931:6415940:643413564341356434944810Variovorax paradoxus EPS chromosome, complete genomeprotein serine/threonine phosphatase7e-29127
NC_016943:21364:4701647016484221407Blastococcus saxobsidens DD2, complete genomeserine/threonine protein phosphatase2e-28126
NC_015514:33972:3690336903382911389Cellulomonas fimi ATCC 484 chromosome, complete genomeprotein serine/threonine phosphatase1e-28126
NC_008781:4178115:421471042147104215495786Polaromonas naphthalenivorans CJ2, complete genomeprotein phosphatase 2C domain protein2e-28125
NC_013441:27877:3078830788323051518Gordonia bronchialis DSM 43247, complete genomePhosphoprotein phosphatase2e-27122
NC_018581:32092:3352533525350421518Gordonia sp. KTR9 chromosome, complete genomeSerine/threonine protein phosphatase2e-27122
NC_009338:817854:8337388337388352881551Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein phosphatase 2C domain-containing protein5e-27121
NC_016114:3711000:3714036371403637155741539Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeSer/Thr phosphatase1e-26120
NC_008146:20047:2292822928244031476Mycobacterium sp. MCS, complete genomeprotein serine/threonine phosphatases7e-27120
NC_008705:27434:2884328843303181476Mycobacterium sp. KMS, complete genomeprotein phosphatase 2C domain protein7e-27120
NC_012791:5496175:551255955125595513359801Variovorax paradoxus S110 chromosome 1, complete genomeprotein serine/threonine phosphatase6e-27120
NC_003155:5302280:5318525531852553200691545Streptomyces avermitilis MA-4680, complete genomemagnesium or manganese-dependent protein phosphatase2e-26119
NC_013929:5097389:5103919510391951054541536Streptomyces scabiei 87.22 chromosome, complete genomeprotein phosphatase4e-26118
NC_009004:2055563:206103720610372061813777Lactococcus lactis subsp. cremoris MG1363, complete genomeputative phosphoprotein phosphatase9e-26117
NC_016584:4905310:492271149227114923430720Desulfosporosinus orientis DSM 765 chromosome, complete genomeserine/threonine protein phosphatase1e-25116
NC_016790:31240:4853048530499841455Corynebacterium diphtheriae VA01 chromosome, complete genomeputative serine/threonine protein phosphatase3e-25115
NC_002935:48687:5003750037514941458Corynebacterium diphtheriae NCTC 13129, complete genomePutative phosphoprotein phosphatase3e-25115
NC_015873:1901939:192421719242171924924708Megasphaera elsdenii DSM 20460, complete genomeprotein phosphatase 2C4e-25115
NC_016801:36000:4996749967514211455Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative serine/threonine protein phosphatase4e-25115
NC_017317:51428:5142851428529391512Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-24113
NC_014151:30488:3353733537349761440Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein serine/threonine phosphatase1e-24113
NC_008752:5213431:522490652249065225718813Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein serine/threonine phosphatase2e-24112
NC_020134:2237421:224167422416742242408735Clostridium stercorarium subsp. stercorarium DSM 8532, completeserine/threonine phosphatase Stp2e-24112
NC_015434:228912:250675250675251394720Verrucosispora maris AB-18-032 chromosome, complete genomeprotein phosphatase 2C domain-containing protein4e-24111
NC_009012:686740:700646700646701383738Clostridium thermocellum ATCC 27405, complete genomeprotein serine/threonine phosphatases1e-23110
NC_015138:5276857:529009852900985290907810Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeprotein serine/threonine phosphatase1e-23110
NC_002570:2616899:262375326237532624502750Bacillus halodurans C-125, complete genomehypothetical protein1e-23110
NC_012121:837586:836846836846837589744Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative Serine/threonine phosphatase, family 2C protein2e-23109
NC_014550:7560:3517735177365711395Arthrobacter arilaitensis Re117, complete genomeprotein phosphatase domain-containing protein6e-23107
NC_015865:3657:1747917479202472769Thermococcus sp. 4557 chromosome, complete genomeSerine/threonine protein phosphatase 2C (PP2C)6e-23107
NC_007929:653814:658506658506659249744Lactobacillus salivarius subsp. salivarius UCC118, complete genomeProtein phosphatase 2C1e-22107
NC_015865:3657:274342743428180747Thermococcus sp. 4557 chromosome, complete genomeprotein serine/threonine phosphatase3e-22105
NC_015677:3965716:398033739803373981122786Ramlibacter tataouinensis TTB310 chromosome, complete genomeprotein phosphatase4e-22105
NC_014657:944000:948013948013948750738Caldicellulosiruptor owensensis OL chromosome, complete genomeprotein serine/threonine phosphatase5e-22104
NC_014221:398636:412103412103413065963Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein serine/threonine phosphatase4e-21101
NC_012804:903539:9257879257879283812595Thermococcus gammatolerans EJ3, complete genomeSerine/threonine protein phosphatase 2C (PP2C)6e-21101
NC_015422:4822636:483580748358074836613807Alicycliphilus denitrificans K601 chromosome, complete genomeprotein serine/threonine phosphatase6e-21100
NC_015562:1708000:1709732170973217107541023Methanotorris igneus Kol 5 chromosome, complete genomeprotein serine/threonine phosphatase8e-21100
NC_013194:761166:779303779303780133831Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeprotein serine/threonine phosphatase2e-2099.4
NC_016587:523215:5382365382365393151080Azospirillum lipoferum 4B plasmid AZO_p4, complete sequenceputative serine/threonine phosphatase5e-2098.2
NC_015563:6357653:636412563641256364907783Delftia sp. Cs1-4 chromosome, complete genomeprotein serine/threonine phosphatase6e-2097.8
NC_015057:30743:342083420834984777Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequenceprotein serine/threonine phosphatase6e-2097.8
NC_003272:637970:6396386396386416802043Nostoc sp. PCC 7120, complete genomehypothetical protein7e-2097.4
NC_016051:241438:2720922720922746832592Thermococcus sp. AM4 chromosome, complete genomeSer/Thr phosphatase1e-1996.7
NC_011992:3615517:362669336266933627508816Acidovorax ebreus TPSY, complete genomeprotein serine/threonine phosphatase2e-1996.3
NC_010002:960027:972061972061972942882Delftia acidovorans SPH-1, complete genomeprotein serine/threonine phosphatase2e-1996.3
NC_008054:1194000:121256312125631213318756Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSerine/threonine protein phosphatase5e-1994.7
NC_018012:4054000:405843840584384059223786Thiocystis violascens DSM 198 chromosome, complete genomeserine/threonine protein phosphatase7e-1890.9
NC_020388:1479568:148985814898581490583726Natronomonas moolapensis 8.8.11 complete genomephosphoprotein phosphatase1e-1789.7
NC_015164:1503352:1512454151245415138091356Bacteroides salanitronis DSM 18170 chromosome, complete genomeprotein serine/threonine phosphatase2e-1789.4
NC_021171:4277484:428739042873904288157768Bacillus sp. 1NLA3E, complete genomeprotein serine/threonine phosphatase3e-1788.6
NC_008312:5105557:5116118511611851180191902Trichodesmium erythraeum IMS101, complete genomeprotein serine/threonine phosphatases4e-1685.1
NC_014963:3942363:395923639592363959961726Terriglobus saanensis SP1PR4 chromosome, complete genomeprotein serine/threonine phosphatase5e-1581.3
NC_008312:4795204:480215048021504802965816Trichodesmium erythraeum IMS101, complete genomeprotein serine/threonine phosphatases9e-1580.5
NC_016816:1823127:183781918378191838610792Pantoea ananatis LMG 5342, complete genometype VI secretion system, serine/threonine protein phosphatase2e-1479.3
NC_008781:1973826:198489119848911985649759Polaromonas naphthalenivorans CJ2, complete genomeprotein phosphatase 2C domain protein2e-1479.3
NC_014804:1183780:120573212057321206298567Thermococcus barophilus MP chromosome, complete genomePrpC-like protein serine/threonine phosphatase3e-1479
NC_014307:1271121:128977212897721290683912Ralstonia solanacearum CFBP2957 chromosome, complete genomeprotein phosphatase (prpc)1e-1377
NC_013730:1572889:1575742157574215771901449Spirosoma linguale DSM 74, complete genomeprotein serine/threonine phosphatase2e-1375.9
NC_014960:1670778:168888316888831689794912Anaerolinea thermophila UNI-1, complete genomeputative protein phosphatase4e-1375.1
NC_009138:2110500:212640021264002127329930Herminiimonas arsenicoxydans, complete genomeputative Serine/threonine specific protein phosphatase3e-1375.1
NC_009953:2808288:280973128097312810450720Salinispora arenicola CNS-205 chromosome, complete genomeprotein serine/threonine phosphatase2e-1272.8
NC_021064:2085231:2106522210652221079761455Propionibacterium avidum 44067, complete genomeprotein phosphatase 2C6e-1271.2
NC_020064:2921809:293728129372812938054774Serratia marcescens FGI94, complete genomeserine/threonine protein phosphatase8e-1270.9
NC_014253:142026:178401178401179039639Methanohalobium evestigatum Z-7303 chromosome, complete genomeprotein serine/threonine phosphatase1e-1170.5
NC_009523:4222696:423652042365204237329810Roseiflexus sp. RS-1 chromosome, complete genomeprotein phosphatase 2C domain-containing protein9e-1270.5
NC_009767:2734166:2735434273543427375092076Roseiflexus castenholzii DSM 13941, complete genomeprotein serine/threonine phosphatase3e-1168.9
NC_014306:679888:694339694339695136798Erwinia billingiae Eb661, complete genomeProtein phosphatase 2C-like3e-1168.9
NC_011992:863174:883824883824884726903Acidovorax ebreus TPSY, complete genomeprotein serine/threonine phosphatase4e-1168.6
NC_016809:1778000:178828117882811788985705Haemophilus influenzae 10810, complete genomehypothetical protein2e-1066.6
NC_011988:1036618:1054796105479610562471452Agrobacterium vitis S4 chromosome 2, complete genomeserine/threonine phosphoprotein phosphatase4e-1065.1
NC_006576:456569:4695454695454713591815Synechococcus elongatus PCC 6301, complete genomehypothetical protein4e-0962
NC_007604:1145373:1149445114944511512591815Synechococcus elongatus PCC 7942, complete genomeprotein serine/threonine phosphatase3e-0962
NC_018697:825058:8397118397118414321722Cycloclasticus sp. P1 chromosome, complete genomeProtein phosphatase 2C-like protein6e-0857.8
NC_010995:404574:4045744045744063371764Cellvibrio japonicus Ueda107, complete genomeputative dual serine/threonine-protein kinase/phosphatase2e-0756.2
NC_018697:825058:8423578423578440601704Cycloclasticus sp. P1 chromosome, complete genomeProtein phosphatase 2C-like protein3e-0755.8
NC_013165:413098:420177420177420959783Slackia heliotrinireducens DSM 20476, complete genomeserine/threonine protein phosphatase3e-0755.5
NC_010172:1222150:1235736123573612374511716Methylobacterium extorquens PA1, complete genomeprotein kinase5e-0754.7
NC_012988:1540587:1561069156106915627841716Methylobacterium extorquens DM4, complete genomedual serine/threonine-protein kinase/phosphatase1e-0653.5
NC_013209:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-01, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017100:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-03, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017108:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-12, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017111:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-32, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017121:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-07, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017125:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-22, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017146:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-26, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_017150:160892:1935011935011945621062Acetobacter pasteurianus IFO 3283-01-42C, complete genomeserine/threonine protein phosphatase3e-0652.4
NC_015942:3090275:311525731152573115979723Acidithiobacillus ferrivorans SS3 chromosome, complete genomeprotein serine/threonine phosphatase7e-0650.8
NC_011757:1246000:1262756126275612644711716Methylobacterium chloromethanicum CM4, complete genomeserine/threonine protein kinase8e-0650.8