Pre_GI: BLASTP Hits

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Query: NC_004578:4465247:4482993 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4482993, End: 4483460, Length: 468

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5481629:550004755000475500514468Pseudomonas fluorescens Pf-5, complete genomeconserved hypothetical protein subfamily, putative6e-76282
NC_018080:4465618:448575944857594486205447Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein1e-60231
NC_008463:4566976:459768945976894598135447Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-60231
NC_002516:1031386:105340010534001053846447Pseudomonas aeruginosa PAO1, complete genomehypothetical protein1e-60231
NC_011770:4763506:478454547845454784991447Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-60230
NC_007484:130896:153104153104153511408Nitrosococcus oceani ATCC 19707, complete genome4-hydroxybenzoyl-CoA thioesterase2e-29127
NC_008781:3056407:307619630761963076651456Polaromonas naphthalenivorans CJ2, complete genomethioesterase superfamily protein6e-29126
NC_014315:114151:137860137860138264405Nitrosococcus watsoni C-113 chromosome, complete genometol-pal system-associated acyl-CoA thioesterase7e-29125
NC_017223:3608749:360943236094323609860429Bordetella pertussis CS chromosome, complete genomehypothetical protein1e-27121
NC_002929:3568106:356924735692473569675429Bordetella pertussis Tohama I, complete genomehypothetical protein1e-27121
NC_018012:1935500:195554719555471956008462Thiocystis violascens DSM 198 chromosome, complete genometol-pal system-associated acyl-CoA thioesterase2e-26118
NC_007973:2888824:291230629123062912710405Ralstonia metallidurans CH34 chromosome 1, complete sequence4-hydroxybenzoyl-CoA thioesterase4e-26116
NC_015726:2817352:283763728376372838041405Cupriavidus necator N-1 chromosome 1, complete sequencethioesterase6e-26116
NC_008060:341851:357733357733358218486Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence4-hydroxybenzoyl-CoA thioesterase3e-25114
NC_010939:321492:342260342260342649390Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein3e-25114
NC_011000:3493575:349608934960893496574486Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative thioesterase2e-25114
NC_010102:2287934:231065623106562311060405Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-25114
NC_010278:315941:337446337446337835390Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein6e-25112
NC_004757:230541:249019249019249429411Nitrosomonas europaea ATCC 19718, complete genome4-hydroxybenzoyl-CoA thioesterase family active site3e-24110
NC_010682:701912:719418719418719822405Ralstonia pickettii 12J chromosome 1, complete sequencetol-pal system-associated acyl-CoA thioesterase5e-24109
NC_012856:737170:757254757254757658405Ralstonia pickettii 12D chromosome 1, complete genometol-pal system-associated acyl-CoA thioesterase6e-24109
NC_009053:313779:332646332646333035390Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein9e-24108
NC_009567:904922:929996929996930406411Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein3e-23107
NC_018643:482676:482264482264482686423Alpha proteobacterium HIMB5 chromosome, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family7e-23106
NC_014924:725380:748898748898749308411Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometol-pal system-associated acyl-CoA thioesterase1e-22105
NC_014311:2733897:273744627374462737823378Ralstonia solanacearum PSI07 chromosome, complete genomeacyl-CoA thioesterase, associated to Tol-Pal complex1e-22105
NC_014166:1809052:182668718266871827055369Arcobacter nitrofigilis DSM 7299 chromosome, complete genomethioesterase superfamily protein2e-1787.8
NC_016831:2209834:223185422318542232195342Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-1683.2
NC_014935:1511835:152334615233461523723378Nitratifractor saLSUginis DSM 16511 chromosome, complete genomethioesterase superfamily protein2e-1478.2
NC_014256:636000:655333655333655734402Helicobacter pylori B8 chromosome, complete genomehypothetical protein3e-1477.8
NC_008783:145305:160943160943161383441Bartonella bacilliformis KC583, complete genometol-pal system-associated acyl-CoA thioesterase5e-1476.6
NC_013440:5543667:554987355498735550271399Haliangium ochraceum DSM 14365, complete genomethioesterase superfamily protein2e-1375.1
NC_019970:743497:750046750046750486441Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family6e-1373.2
NC_017249:8576294:8612359861235986144162058Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-1373.2
NC_007759:1666967:166765916676591668075417Syntrophus aciditrophicus SB, complete genomethioesterase4e-1270.5
NC_012796:3267569:326839532683953268829435Desulfovibrio magneticus RS-1, complete genomehypothetical protein4e-1270.5
NC_015318:1151422:116373511637351164124390Hippea maritima DSM 10411 chromosome, complete genomethioesterase superfamily protein5e-1270.1
NC_017167:1648913:176365217636521764044393Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-14-hydroxybenzoyl-CoA thioesterase1e-1168.9
NC_020304:547036:551274551274551711438Desulfocapsa sulfexigens DSM 10523, complete genomeacyl-CoA thioester hydrolase, YbgC/YbaW family4e-1167.4
NC_017192:88940:100571100571100945375Arcobacter sp. L, complete genomeputative thioesterase1e-1065.1
NC_011830:2940500:294837029483702948819450Desulfitobacterium hafniense DCB-2, complete genomethioesterase superfamily protein6e-1063.2
NC_012489:1874415:187596218759621876474513Gemmatimonas aurantiaca T-27, complete genomeputative hydrolase1e-0962
NC_003106:1027176:103228510322851032689405Sulfolobus tokodaii str. 7, complete genomehypothetical protein4e-0960.5
NC_008312:6932847:694844469484446948929486Trichodesmium erythraeum IMS101, complete genome4-hydroxybenzoyl-CoA thioesterase5e-0960.1
NC_005945:3359598:337422333742233374642420Bacillus anthracis str. Sterne, complete genome4-hydroxybenzoyl-CoA thioesterase, putative2e-0858.2
NC_008786:2850736:286375928637592864178420Verminephrobacter eiseniae EF01-2, complete genomethioesterase superfamily protein3e-0857.4
NC_012589:87592:929689296893372405Sulfolobus islandicus L.S.2.15, complete genomethioesterase superfamily protein1e-0755.8
NC_012588:87592:929689296893372405Sulfolobus islandicus M.14.25 chromosome, complete genomethioesterase superfamily protein1e-0755.8
NC_012632:87590:929669296693370405Sulfolobus islandicus M.16.27 chromosome, complete genomethioesterase superfamily protein1e-0755.8
NC_013769:87582:929729297293376405Sulfolobus islandicus L.D.8.5 chromosome, complete genomethioesterase superfamily protein1e-0755.8
NC_017276:85380:928159281593219405Sulfolobus islandicus REY15A chromosome, complete genomethioesterase superfamily protein1e-0755.8
NC_012780:284336:297776297776298195420Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein9e-0855.8
NC_016024:1472421:149044014904401490883444Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein2e-0755.1
NC_013922:2463299:246423224642322464642411Natrialba magadii ATCC 43099 chromosome, complete genomethioesterase superfamily protein3e-0753.9
NC_015732:30472:304723047230870399Spirochaeta caldaria DSM 7334 chromosome, complete genome4-hydroxybenzoyl-CoA thioesterase8e-0752.8
NC_015760:2009425:201475220147522015165414Streptococcus salivarius CCHSS3, complete genomeesterase3e-0650.8
NC_008025:1799106:180236518023651802781417Deinococcus geothermalis DSM 11300, complete genome4-hydroxybenzoyl-CoA thioesterase9e-0649.3