Pre_GI: BLASTP Hits

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Query: NC_004578:4465247:4479461 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 4479461, End: 4480762, Length: 1302

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:5481629:5496537549653754978381302Pseudomonas fluorescens Pf-5, complete genometranslocation protein TolB precursor0810
NC_018080:4465618:4482258448225844835561299Pseudomonas aeruginosa DK2 chromosome, complete genometranslocation protein TolB0712
NC_002516:1031386:1056049105604910573471299Pseudomonas aeruginosa PAO1, complete genometranslocation protein TolB precursor0712
NC_011770:4763506:4781044478104447823421299Pseudomonas aeruginosa LESB58, complete genomeTolB protein0712
NC_008463:4566976:4594188459418845954861299Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolB protein0712
NC_018012:1935500:1951795195179519531051311Thiocystis violascens DSM 198 chromosome, complete genometol-pal system beta propeller repeat protein TolB5e-103375
NC_003902:3544743:3563466356346635647851320Xanthomonas campestris pv. campestris str. ATCC 33913, completetranslocation protein TolB3e-101369
NC_004757:230541:2514632514632527401278Nitrosomonas europaea ATCC 19718, complete genometranslocation protein TolB precursor5e-94345
NC_012125:793812:7938127938127951161305Salmonella enterica subsp. enterica serovar Paratyphi C straintranslocation protein TolB6e-93341
NC_003197:815964:8159648159648172561293Salmonella typhimurium LT2, complete genometranslocation protein TolB precursor9e-93340
NC_011274:793681:7936817936817949731293Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91translocation protein TolB9e-93340
NC_011149:779903:7799037799037811981296Salmonella enterica subsp. enterica serovar Agona str. SL483,tol-Pal system beta propeller repeat protein TolB8e-93340
NC_011080:819103:8204028204028216971296Salmonella enterica subsp. enterica serovar Newport str. SL254,tol-Pal system beta propeller repeat protein TolB8e-93340
NC_011083:862901:8642008642008654951296Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tol-Pal system beta propeller repeat protein TolB8e-93340
NC_010102:2287934:2306876230687623081711296Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-93340
NC_011205:839425:8407248407248420191296Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853translocation protein TolB8e-93340
NC_016831:2209834:2228074222807422293691296Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtolB protein precursor8e-93340
NC_010694:2565580:2592862259286225941541293Erwinia tasmaniensis, complete genomeProtein TolB (translocation of group A colicins)1e-91337
NC_009053:313779:3355983355983368781281Actinobacillus pleuropneumoniae L20, complete genometranslocation protein TolB precursor4e-91335
NC_012214:2673058:2698885269888527001771293Erwinia pyrifoliae Ep1/96, complete genomeProtein TolB (Translocation of group A colicins)1e-90333
NC_014311:2733897:2733897273389727351981302Ralstonia solanacearum PSI07 chromosome, complete genomeprotein tolB, component of the tol-pal system1e-89330
NC_007973:2888824:2908503290850329098431341Ralstonia metallidurans CH34 chromosome 1, complete sequenceTolB-like protein3e-87322
NC_015563:3786192:3811116381111638124351320Delftia sp. Cs1-4 chromosome, complete genomeprotein tolB6e-86318
NC_015138:2025000:2028999202899920303181320Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeTol-Pal system beta propeller repeat protein TolB7e-86318
NC_012856:737170:7599427599427612461305Ralstonia pickettii 12D chromosome 1, complete genomeTol-Pal system beta propeller repeat protein TolB1e-85317
NC_014922:825396:8270698270698283521284Haemophilus influenzae F3047 chromosome, complete genomeTolB protein1e-85317
NC_015726:2817352:2833783283378328351561374Cupriavidus necator N-1 chromosome 1, complete sequenceprotein TolB4e-85315
NC_009567:904922:9262299262299275121284Haemophilus influenzae PittGG chromosome, complete genometranslocation protein TolB3e-85315
NC_014910:1708045:1708045170804517093671323Alicycliphilus denitrificans BC chromosome, complete genometol-pal system beta propeller repeat protein tolb3e-84312
NC_012791:2832001:2835571283557128367971227Variovorax paradoxus S110 chromosome 1, complete genomeTol-Pal system beta propeller repeat protein TolB8e-84311
NC_014931:2929695:2929695292969529309211227Variovorax paradoxus EPS chromosome, complete genomeTol-Pal system beta propeller repeat protein TolB1e-83310
NC_010682:701912:7220917220917233951305Ralstonia pickettii 12J chromosome 1, complete sequenceTol-Pal system beta propeller repeat protein TolB3e-83309
NC_011000:3493575:3499003349900335002981296Burkholderia cenocepacia J2315 chromosome 1, complete sequencetranslocation protein TolB5e-83308
NC_008060:341851:3539943539943552891296Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceTolB-like2e-82306
NC_014394:2765261:2783516278351627847841269Gallionella capsiferriformans ES-2 chromosome, complete genomeTol-Pal system beta propeller repeat protein TolB2e-78293
NC_009720:3377071:3395637339563733969891353Xanthobacter autotrophicus Py2, complete genomebeta-propeller repeat-containing to-pal system protein TolB1e-57224
NC_008783:145305:1562681562681575961329Bartonella bacilliformis KC583, complete genomeTol-Pal system beta propeller repeat protein TolB3e-46186
NC_013222:1898164:189816418981641899075912Robiginitalea biformata HTCC2501, complete genometolB protein5e-22105
NC_014166:2319447:2334788233478823360561269Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeTolB domain-containing protein1e-1688.2
NC_008011:860000:8710458710458724031359Lawsonia intracellularis PHE/MN1-00, complete genomePeriplasmic component of the Tol biopolymer transport system1e-1584.7
NC_008536:8541267:8562673856267385637851113Solibacter usitatus Ellin6076, complete genometranscriptional regulatory protein-like protein2e-1584.3
NC_011296:909558:9276759276759288621188Thermodesulfovibrio yellowstonii DSM 11347, complete genomeprotein TolB, putative2e-1584
NC_013730:906389:9063899063899094063018Spirosoma linguale DSM 74, complete genomeamidohydrolase4e-1582.8
NC_008536:33776:3540835408380412634Solibacter usitatus Ellin6076, complete genomeserine/threonine protein kinase5e-1582.8
NC_008599:1489868:1497325149732514985901266Campylobacter fetus subsp. fetus 82-40, complete genomeprotein TolB3e-1480.1
NC_017192:2114433:2118314211831421195851272Arcobacter sp. L, complete genometranslocation protein TolB6e-1479
NC_014254:18193:1819318193239375745Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completeAPHP domain-containing protein4e-1272.8
NC_014298:310964:3354383354383385783141Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceperiplasmic component of the Tol biopolymer transport system7e-1168.9
NC_013730:6933754:6949021694902169523143294Spirosoma linguale DSM 74, complete genomepeptidase S411e-1068.2
NC_020054:2679676:2682862268286226861583297Fibrella aestuarina BUZ 2 drat genomepeptidase S412e-0963.9
NC_020389:3142924:3142924314292431442821359Methanosarcina mazei Tuc01, complete genomePeriplasmic component of the Tol biopolymer transport system -like protein2e-0963.9
NC_016147:513819:5295795295795325362958Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative amidohydrolase5e-0962.8
NC_017187:1511567:1518174151817415194661293Arcobacter butzleri ED-1, complete genometranslocation protein TolB8e-0962
NC_009850:1601982:1602667160266716039591293Arcobacter butzleri RM4018, complete genomecolicin tolerance-like protein (tolB)8e-0962
NC_019940:1932906:194813719481371949078942Thioflavicoccus mobilis 8321 chromosome, complete genomeTol biopolymer transport system periplasmic protein1e-0758.2
NC_015510:1012195:1014822101482210169812160Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomepeptidase S9 prolyl oligopeptidase active site domain-containing protein6e-0755.8
NC_015510:4905345:4925080492508049285683489Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeamidohydrolase9e-0755.1
NC_014829:1475000:1475289147528914772892001Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeWD40-like beta Propeller containing protein1e-0655.1
NC_008700:672326:6822086822086843162109Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, CadC1e-0654.7
NC_014479:3079855:3099529309952931015021974Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative acylaminoacyl-peptidase2e-0653.9
NC_010175:448020:4658944658944690823189Chloroflexus aurantiacus J-10-fl, complete genomepeptidase S413e-0653.5
NC_012032:448161:4660364660364692243189Chloroflexus sp. Y-400-fl, complete genomepeptidase S413e-0653.5
NC_011891:4169796:4172148417214841752733126Anaeromyxobacter dehalogenans 2CP-1, complete genomehypothetical protein4e-0653.1
NC_020156:2750000:2760425276042527636703246Nonlabens dokdonensis DSW-6, complete genomeputative peptidase/protease family protein6e-0652.8
NC_015572:4576778:458858545885854589457873Methylomonas methanica MC09 chromosome, complete genomeWD40-like beta Propeller containing protein5e-0652.8
NC_015703:3637312:3654249365424936575663318Runella slithyformis DSM 19594 chromosome, complete genomepeptidase S415e-0652.8
NC_006177:1060428:1071764107176410739832220Symbiobacterium thermophilum IAM 14863, complete genomeacylaminoacyl-peptidase7e-0652.4
NC_013166:784339:7991677991678013922226Kangiella koreensis DSM 16069, complete genometranscriptional regulator, CadC8e-0652
NC_015711:3193774:3199161319916132011972037Myxococcus fulvus HW-1 chromosome, complete genomeS9C family peptidase8e-0652
NC_016776:66223:6622366223694953273Bacteroides fragilis 638R, complete genomeputative peptidase/protease family protein9e-0652
NC_003228:76140:7614076140794123273Bacteroides fragilis NCTC 9343, complete genomeputative peptidase/protease family protein9e-0652
NC_006347:70607:7060770607738793273Bacteroides fragilis YCH46, complete genomeputative Tricorn-like protease1e-0552
NC_007760:4143301:4143301414330141464263126Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein1e-0551.6