Pre_GI: BLASTP Hits

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Query: NC_004578:2671508:2692713 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 2692713, End: 2693924, Length: 1212

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012721:2223641:2246713224671322479871275Burkholderia glumae BGR1 chromosome 2, complete genomeAcyl-CoA dehydrogenase5e-86318
NC_010296:2695186:2713846271384627150601215Microcystis aeruginosa NIES-843, complete genomeputative acyl-CoA dehydrogenase1e-77290
NC_011894:5056901:5088976508897650902231248Methylobacterium nodulans ORS 2060, complete genomeAcyl-CoA dehydrogenase type 2 domain protein4e-75282
NC_014841:41773:4177341773430261254Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceAcyl-CoA dehydrogenase type 2 domain protein2e-69263
NC_004578:2671508:2693952269395226951391188Pseudomonas syringae pv. tomato str. DC3000, complete genomeacyl-CoA dehydrogenase family protein9e-57221
NC_008027:3677500:3691965369196536931971233Pseudomonas entomophila L48, complete genomeacyl-CoA dehydrogenase1e-44181
NC_014306:1981956:1981956198195619831791224Erwinia billingiae Eb661, complete genomeAcyl-CoA dehydrogenase2e-30133
NC_008596:4152916:4174286417428641755151230Mycobacterium smegmatis str. MC2 155, complete genomeacyl-CoA dehydrogenase domain protein5e-27122
NC_010407:410918:4152014152014163251125Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein8e-24111
NC_007509:644000:6440616440616452781218Burkholderia sp. 383 chromosome 3, complete sequenceAcyl-CoA dehydrogenase-like5e-22105
NC_008596:4152916:4170932417093241721431212Mycobacterium smegmatis str. MC2 155, complete genomeacyl-CoA dehydrogenase2e-1997.1
NC_008596:4152916:4159822415982241609791158Mycobacterium smegmatis str. MC2 155, complete genomeputative acyl-CoA dehydrogenase2e-1997.1
NC_009439:4734237:4750374475037447516031230Pseudomonas mendocina ymp, complete genomeacyl-CoA dehydrogenase type 22e-1893.6
NC_012856:737170:7916447916447928161173Ralstonia pickettii 12D chromosome 1, complete genomeAcyl-CoA dehydrogenase type 2 domain protein6e-1685.5
NC_018581:3871000:3889966388996638912041239Gordonia sp. KTR9 chromosome, complete genomeAcyl-CoA dehydrogenase3e-1583.6
NC_007952:444616:4456324456324468461215Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative Acyl-CoA dehydrogenase1e-1377.8
NC_012560:3200961:3215240321524032164301191Azotobacter vinelandii DJ, complete genomeAcyl-CoA dehydrogenase family protein1e-1067.8
NC_021150:3200959:3215238321523832164281191Azotobacter vinelandii CA6, complete genomeAcyl-CoA dehydrogenase family protein1e-1067.8
NC_010581:561579:5776935776935789161224Beijerinckia indica subsp. indica ATCC 9039, complete genomeAcyl-CoA dehydrogenase type 2 domain8e-1065.5
NC_020064:3998715:4029308402930840305251218Serratia marcescens FGI94, complete genomeacyl-CoA dehydrogenase9e-1065.1
NC_010407:410918:4139694139694152041236Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative dehydrogenase1e-0964.7
NC_009485:3461051:3461051346105134622351185Bradyrhizobium sp. BTAi1 chromosome, complete genomeacyl-CoA dehydrogenase7e-0962.4
NC_016885:2294000:2314557231455723157711215Pyrobaculum oguniense TE7 chromosome, complete genomeacyl-CoA dehydrogenase6e-0962.4
NC_003454:2080705:2090185209018520920951911Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeACYL-COA dehydrogenase, short-chain specific1e-0861.6
NC_009953:2388605:2403039240303924042171179Salinispora arenicola CNS-205 chromosome, complete genomeacyl-CoA dehydrogenase type 22e-0860.5
NC_011961:891815:9067589067589079301173Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencepigment production hydroxylase7e-0858.9
NC_013446:4045000:4067300406730040684931194Comamonas testosteroni CNB-2, complete genomeacyl-CoA dehydrogenase-like protein4e-0756.6
NC_014098:1258559:1285014128501412861861173Bacillus tusciae DSM 2912 chromosome, complete genomeacyl-CoA dehydrogenase domain protein5e-0756.2
NC_011146:4070000:4090803409080340919451143Geobacter bemidjiensis Bem, complete genomeacyl-CoA dehydrogenase domain protein5e-0755.8
NC_014118:1592000:1620393162039316215771185Burkholderia sp. CCGE1002 chromosome chromosome 2, completeAcyl-CoA dehydrogenase type 2 domain protein5e-0755.8
NC_017179:1133510:1137839113783911389751137Clostridium difficile BI1, complete genomebutyryl-CoA dehydrogenase6e-0755.8
NC_013315:1123733:1128062112806211291981137Clostridium difficile CD196 chromosome, complete genomebutyryl-CoA dehydrogenase6e-0755.8
NC_015726:2817352:2817352281735228185451194Cupriavidus necator N-1 chromosome 1, complete sequenceacyl-CoA dehydrogenase9e-0755.1
NC_021182:1473535:1480221148022114813601140Clostridium pasteurianum BC1, complete genomeacyl-CoA dehydrogenase9e-0755.1
NC_018581:1718023:1754559175455917557281170Gordonia sp. KTR9 chromosome, complete genomeAcyl-CoA dehydrogenase1e-0654.7
NC_015634:652000:6784146784146795501137Bacillus coagulans 2-6 chromosome, complete genomeAcyl-CoA dehydrogenase type 2 domain-containing protein2e-0654.3
NC_012856:798922:8007158007158019081194Ralstonia pickettii 12D chromosome 1, complete genomeacyl-CoA dehydrogenase domain protein2e-0653.9
NC_021171:2019755:2029223202922320304611239Bacillus sp. 1NLA3E, complete genomeacyl-CoA dehydrogenase domain-containing protein2e-0653.9
NC_014632:312000:3213783213783225231146Ilyobacter polytropus DSM 2926 chromosome, complete genomebutyryl-CoA dehydrogenase2e-0653.9
NC_004557:2552418:2565424256542425665631140Clostridium tetani E88, complete genomebutyryl-coA dehydrogenase3e-0653.5
NC_015660:3467579:3490539349053934917411203Geobacillus thermoglucosidasius C56-YS93 chromosome, completeacyl-CoA dehydrogenase domain-containing protein5e-0652.8
NC_014761:743113:7570887570887582091122Oceanithermus profundus DSM 14977 chromosome, complete genomebutyryl-CoA dehydrogenase5e-0652.8
NC_006510:1731939:1766882176688217680601179Geobacillus kaustophilus HTA426, complete genomeshort chain-specific acyl-CoA dehydrogenase6e-0652.4
NC_016947:2210339:2235264223526422364331170Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein8e-0652