Pre_GI: BLASTP Hits

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Query: NC_004578:212468:225386 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 225386, End: 226549, Length: 1164

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017353:152151:1630081630081641981191Staphylococcus lugdunensis N920143, complete genomeputative transport protein2e-1480.5
NC_015690:1967244:1985316198531619865331218Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein9e-1478.2
NC_020164:89214:1000111000111011891179Staphylococcus warneri SG1, complete genometransporter3e-1376.6
NC_016935:2503071:2516532251653225177491218Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-1376.3
NC_005957:2196000:2200164220016422013091146Bacillus thuringiensis serovar konkukian str. 97-27, completeGlpT transporter; possible quinolone resistence NorA protein2e-0757
NC_011773:2239753:2244463224446322456081146Bacillus cereus AH820 chromosome, complete genomemajor facilitator family transporter2e-0757
NC_014335:2151404:2156801215680121579461146Bacillus cereus biovar anthracis str. CI chromosome, completeglycerol-3-phosphate transporter2e-0757
NC_007530:2175967:2180632218063221817771146Bacillus anthracis str. 'Ames Ancestor', complete genomemajor facilitator family transporter4e-0756.2
NC_005945:2175871:2180614218061421817591146Bacillus anthracis str. Sterne, complete genomemajor facilitator family transporter4e-0756.2
NC_003997:2175843:2180508218050821816531146Bacillus anthracis str. Ames, complete genomemajor facilitator family transporter4e-0756.2
NC_012659:2175867:2180532218053221816771146Bacillus anthracis str. A0248, complete genomemajor facilitator family transporter4e-0756.2
NC_013768:29324:2932429324304721149Listeria monocytogenes 08-5923, complete genomehypothetical protein5e-0755.8
NC_013766:29324:2932429324304721149Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein5e-0755.8
NC_011658:2275864:2279953227995322810981146Bacillus cereus AH187 chromosome, complete genomemajor facilitator family transporter7e-0755.5
NC_014171:2177353:2183019218301921841641146Bacillus thuringiensis BMB171 chromosome, complete genomequinolone resistance protein NorA2e-0653.9
NC_006274:765870:7860977860977876171521Bacillus cereus E33L, complete genomequinolone resistence protein, major facilitator family transporter3e-0653.5
NC_011725:2206000:2210875221087522120201146Bacillus cereus B4264 chromosome, complete genomemajor facilitator family transporter8e-0652