Pre_GI: BLASTP Hits

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Query: NC_004547:913553:937554 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 937554, End: 938135, Length: 582

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:833721:855945855945856526582Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeNUDIX hydrolase6e-108389
NC_013421:1038500:104165510416551042236582Pectobacterium wasabiae WPP163, complete genomeNUDIX hydrolase2e-100364
NC_012880:3748665:376694937669493767524576Dickeya dadantii Ech703, complete genomeNUDIX hydrolase4e-91333
NC_014837:3126543:313990131399013140479579Pantoea sp. At-9b chromosome, complete genomeNUDIX hydrolase2e-74277
NC_015761:2444833:245193024519302452505576Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-64244
NC_010634:3155741:317525631752563175852597Yersinia pseudotuberculosis PB1/+, complete genomeNUDIX hydrolase1e-63242
NC_006155:3237990:325774432577443258367624Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-63242
NC_009078:2718741:272248427224842723071588Burkholderia pseudomallei 1106a chromosome II, complete sequencenudix hydrolase, YffH family2e-54211
NC_007435:1446916:145065914506591451246588Burkholderia pseudomallei 1710b chromosome II, complete sequenceconserved hypothetical protein TIGR000522e-54211
NC_006351:2759708:276157627615762762172597Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-54211
NC_010623:188143:191830191830192417588Burkholderia phymatum STM815 chromosome 2, complete sequenceNUDIX hydrolase7e-54209
NC_007952:1416000:142246714224671423063597Burkholderia xenovorans LB400 chromosome 2, complete sequenceConserved hypothetical protein 521e-53209
NC_008060:476861:505264505264505863600Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceNucleoside diphosphate pyrophosphatase1e-52205
NC_008542:1021848:104991110499111050510600Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceNucleoside diphosphate pyrophosphatase1e-52205
NC_010508:981377:100316710031671003766600Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceNUDIX hydrolase1e-52205
NC_009832:2460027:246088324608832461479597Serratia proteamaculans 568, complete genomeNUDIX hydrolase4e-52204
NC_008752:3684739:368473936847393685347609Acidovorax avenae subsp. citrulli AAC00-1, complete genomeNUDIX hydrolase1e-50199
NC_014100:172452:171868171868172455588Caulobacter segnis ATCC 21756 chromosome, complete genomeNUDIX hydrolase1e-50199
NC_015138:2110149:212599021259902126571582Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completenucleoside diphosphate pyrophosphatase2e-50198
NC_002696:3759551:377783537778353778422588Caulobacter crescentus CB15, complete genomehypothetical protein4e-50197
NC_015638:2588954:260159626015962602174579Lacinutrix sp. 5H-3-7-4 chromosome, complete genomenucleoside diphosphate pyrophosphatase9e-48189
NC_017186:5184000:519829351982935198850558Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-46185
NC_014318:5183975:519825951982595198816558Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein1e-46185
NC_010572:1293786:129721412972141297921708Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein1e-45182
NC_013521:107937:124163124163124873711Sanguibacter keddieii DSM 10542, complete genomeprotein containing C-terminal region of TrgB protein3e-45181
NC_011666:2435438:243962924396292440225597Methylocella silvestris BL2, complete genomeNUDIX hydrolase7e-44176
NC_008344:2465042:248701224870122487647636Nitrosomonas eutropha C91, complete genomeNucleoside diphosphate pyrophosphatase1e-1996.3
NC_012115:1122905:114326811432681143843576Nautilia profundicola AmH, complete genomehypothetical protein8e-1786.7
NC_011420:1178762:119509311950931195734642Rhodospirillum centenum SW, complete genomehypothetical protein1e-1686.3
NC_010468:694943:716660716660717289630Escherichia coli ATCC 8739, complete genomeADP-ribose diphosphatase3e-1684.7
NC_013353:3787991:378799137879913788620630Escherichia coli O103:H2 str. 12009, complete genomeADP-ribose pyrophosphatase4e-1684.3
NC_012947:708064:728457728457729086630Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeADP-ribose pyrophosphatase NudF4e-1684.3
AP010958:3787991:378799137879913788620630Escherichia coli O103:H2 str. 12009 DNA, complete genomeADP-ribose pyrophosphatase4e-1684.3
NC_004578:5623783:564362756436275644244618Pseudomonas syringae pv. tomato str. DC3000, complete genomemutT/nudix family protein2e-1478.6
NC_016632:1399993:140161314016131402266654Serratia symbiotica str. 'Cinara cedri' chromosome, completeADP-ribose pyrophosphatase1e-1376.6
NC_015931:71361:756267562676159534Pyrolobus fumarii 1A, complete genomeNUDIX hydrolase8e-1373.6
NC_014377:1227850:124090112409011241443543Thermosediminibacter oceani DSM 16646 chromosome, complete genomeNUDIX hydrolase3e-1271.6
NC_007802:1991211:1991211199121119923381128Jannaschia sp. CCS1, complete genomeNucleoside diphosphate pyrophosphatase4e-1271.2
NC_011661:1049767:106594210659421066496555Dictyoglomus turgidum DSM 6724, complete genomeNUDIX hydrolase1e-1065.9
NC_017063:834674:835992835992836630639Helicobacter pylori ELS37 chromosome, complete genomeUDP-sugar diphosphatase4e-1064.7
NC_008789:7347:298992989930540642Halorhodospira halophila SL1, complete genomeNUDIX hydrolase5e-1063.9
NC_012968:1731976:173740117374011737943543Methylotenera mobilis JLW8, complete genomeNUDIX hydrolase7e-1063.5
NC_007643:1781723:179533217953321795964633Rhodospirillum rubrum ATCC 11170, complete genomeNucleoside diphosphate pyrophosphatase4e-0961.2
NC_019897:2004050:202928420292842029856573Thermobacillus composti KWC4 chromosome, complete genomeADP-ribose pyrophosphatase7e-0960.5
NC_011744:688000:714370714370714942573Vibrio splendidus LGP32 chromosome 2, complete genomeMutT/nudix family protein3e-0858.5
NC_007614:2517226:253693425369342537533600Nitrosospira multiformis ATCC 25196 chromosome 1, completeNUDIX hydrolase3e-0858.5
NC_014654:1548194:155400015540001554533534Halanaerobium sp. 'sapolanicus' chromosome, complete genomeNUDIX hydrolase6e-0857.4
NC_005125:3446470:346624934662493466854606Gloeobacter violaceus PCC 7421, complete genomehypothetical protein9e-0856.6
NC_003364:281000:302854302854303366513Pyrobaculum aerophilum str. IM2, complete genomeADP ribose hydrolase, putative (mutT/nudix family protein)4e-0754.3
NC_017080:3317701:331770133177013318288588Phycisphaera mikurensis NBRC 102666, complete genomeADP-ribose pyrophosphatase1e-0653.1
NC_011146:4070000:407256040725604073081522Geobacter bemidjiensis Bem, complete genomeNUDIX hydrolase1e-0652.8
NC_016024:1099602:110120211012021101801600Candidatus Chloracidobacterium thermophilum B chromosome chromosomeNTP pyrophosphohydrolase2e-0652.4
NC_015161:354000:358625358625359128504Deinococcus proteolyticus MRP chromosome, complete genomeNUDIX hydrolase6e-0650.8