Pre_GI: BLASTP Hits

Some Help

Query: NC_004547:1970686:1972671 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 1972671, End: 1972985, Length: 315

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2921932:294337829433782943692315Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar hook-basal body complex subunit FliE4e-52202
NC_008800:2695977:273047727304772730788312Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar hook-basal body protein FliE1e-35147
NC_015224:2017781:202285120228512023168318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar hook-basal body protein FliE1e-35147
NC_014500:3023762:305122430512243051538315Dickeya dadantii 3937 chromosome, complete genomeflagellar hook-basal body complex protein fliE1e-34145
NC_012912:1788308:179344417934441793758315Dickeya zeae Ech1591, complete genomeflagellar hook-basal body complex subunit FliE1e-33141
NC_014562:1844268:186503718650371865348312Pantoea vagans C9-1 chromosome, complete genomePutative lagellar hook-basal body complex protein fliE8e-33139
NC_013592:1730505:173428717342871734601315Dickeya dadantii Ech586, complete genomeflagellar hook-basal body complex subunit FliE6e-33139
NC_016514:2950860:297587229758722976183312Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar hook-basal body complex protein fliE4e-33139
NC_009778:1222273:122728712272871227598312Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-32138
NC_012880:1765920:182147218214721821807336Dickeya dadantii Ech703, complete genomeflagellar hook-basal body complex subunit FliE6e-32135
NC_016816:1912366:191909719190971919408312Pantoea ananatis LMG 5342, complete genomeflagellar hook-basal body complex subunit FliE7e-31132
NC_014837:2586870:260221126022112602522312Pantoea sp. At-9b chromosome, complete genomeflagellar hook-basal body complex subunit FliE4e-26116
NC_009138:1843998:189279618927961893155360Herminiimonas arsenicoxydans, complete genomeflagellar biosynthesis; basal-body component FliE2e-1581.3
NC_015733:4253961:425575542557554256087333Pseudomonas putida S16 chromosome, complete genomeflagellar hook-basal body protein FliE3e-1373.9
NC_004344:26828:657976579766126330Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-1167.8
NC_007508:2277640:227937822793782279749372Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar hook-basal body complex protein FliE3e-0960.5
NC_007912:2768363:278560327856032785968366Saccharophagus degradans 2-40, complete genomehypothetical protein2e-0857.4
NC_009486:1403175:140704014070401407324285Thermotoga petrophila RKU-1 chromosome, complete genomeflagellar hook-basal body complex subunit FliE6e-0856.2
NC_010483:1467616:147148114714811471765285Thermotoga sp. RQ2, complete genomeflagellar hook-basal body complex subunit FliE6e-0856.2
NC_013642:1425795:143129214312921431576285Thermotoga naphthophila RKU-10, complete genomeflagellar hook-basal body complex subunit FliE6e-0856.2
NC_015138:4905935:490781949078194908136318Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar hook-basal body complex subunit FliE8e-0855.8
NC_015966:2337833:237421323742132374521309Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeFlagellar hook-basal body complex protein fliE9e-0855.8
NC_008340:774206:791019791019791345327Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar hook-basal body complex subunit FliE2e-0754.7
NC_008593:1103293:110934111093411109652312Clostridium novyi NT, complete genomeflagellar hook-basal body complex protein (FliE)8e-0752.4
NC_015565:1920329:192032919203291920619291Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeFlagellar hook-basal body complex protein fliE1e-0652
NC_009253:2615777:263039626303962630686291Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar hook-basal body complex subunit FliE1e-0651.6
NC_009012:574145:578918578918579232315Clostridium thermocellum ATCC 27405, complete genomeflagellar hook-basal body complex subunit FliE3e-0650.4
NC_009092:1504363:157464815746481574980333Shewanella loihica PV-4, complete genomeflagellar hook-basal body complex subunit FliE6e-0649.7
NC_015422:2806832:283850128385012838809309Alicycliphilus denitrificans K601 chromosome, complete genomeflagellar hook-basal body complex protein fliE7e-0649.3
NC_014355:2210884:223338722333872233698312Candidatus Nitrospira defluvii, complete genomeflagellar hook-basal body complex protein FliE1e-0548.9