Pre_GI: BLASTP Hits

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Query: NC_004463:60225:68941 Bradyrhizobium japonicum USDA 110, complete genome

Start: 68941, End: 70365, Length: 1425

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:60216:698446984470356513Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-83309
NC_017030:6061070:6069349606934960745475199Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein5e-25115
NC_009720:4406991:443098644309864431774789Xanthobacter autotrophicus Py2, complete genomehypothetical protein9e-22105
NC_007614:620500:6254556254556266661212Nitrosospira multiformis ATCC 25196 chromosome 1, completeresponse regulator receiver domain protein (CheY-like)2e-1894
NC_016830:2642881:2657055265705526582691215Pseudomonas fluorescens F113 chromosome, complete genomeResponse regulator receiver domain protein5e-1789.4
NC_015320:743983:754481754481755221741Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein6e-1789.4
NC_008577:2604281:261531626153162616128813Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein8e-1788.6
NC_013958:29548:4374243742448061065Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequencehypothetical protein2e-1687.4
NC_009831:4447919:4458251445825144614033153Shewanella sediminis HAW-EB3, complete genomeNucleoside phosphorylase-like protein3e-1686.7
NC_016631:3917253:3942622394262239463863765Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein9e-1582
NC_020126:4622371:4634733463473346393854653Myxococcus stipitatus DSM 14675, complete genomehypothetical protein1e-1481.6
NC_013595:8338619:836039383603938361283891Streptosporangium roseum DSM 43021, complete genomeNucleoside phosphorylase-like protein2e-1480.9
NC_014098:3008951:301942630194263020202777Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein4e-1479.7
NC_011002:772243:789813789813790787975Burkholderia cenocepacia J2315 chromosome 3, complete sequence6e-1479.3
NC_014733:2363838:2372684237268423738621179Methylovorus sp. MP688 chromosome, complete genomeresponse regulator receiver protein8e-1479
NC_020064:3609844:3619415361941536206141200Serratia marcescens FGI94, complete genomenucleoside phosphorylase8e-1479
NC_016830:1182765:1195993119599311975821590Pseudomonas fluorescens F113 chromosome, complete genomelysogenic conversion protein9e-1478.6
NC_010322:4623867:466249546624954663325831Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein2e-1377.4
NC_017030:5874824:5888531588853158897421212Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein4e-1376.6
NC_008543:582129:5907625907625920091248Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceresponse regulator receiver protein9e-1375.1
NC_007760:645016:6514236514236526461224Anaeromyxobacter dehalogenans 2CP-C, complete genomeresponse regulator receiver domain protein (CheY-like)3e-1273.6
NC_020126:1873794:1884444188444418878483405Myxococcus stipitatus DSM 14675, complete genomehypothetical protein4e-1273.2
NC_014314:1148000:115523811552381155894657Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein2e-1171.2
NC_004463:60225:6467464674658101137Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein5e-1169.3
NC_017249:60216:6467464674658011128Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-1169.3
NC_016822:1431200:147854214785421479336795Shigella sonnei 53G, complete genomehypothetical protein1e-1068.6
NC_019673:6473743:6475737647573764785112775Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1067.4
NC_009453:36599:4777947779504542676Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative ATP-binding protein2e-1067.4
NC_010572:4505428:451802545180254518822798Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-1067
NC_015381:3607626:361637136163713617357987Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-1066.6
NC_018531:3983925:399530339953033996172870Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein6e-1065.9
NC_009380:4944183:4946339494633949474991161Salinispora tropica CNB-440 chromosome, complete genomepurine phosphorylase family 11e-0965.1
NC_007490:76838:9729397293984831191Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequencehypothetical protein2e-0964.3
NC_009434:608765:6671426671426686651524Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-0964.3
NC_016109:8635989:865312786531278654068942Kitasatospora setae KM-6054, complete genomehypothetical protein4e-0963.2
NC_007645:6407370:6416359641635964174711113Hahella chejuensis KCTC 2396, complete genomehypothetical protein8e-0962
NC_012988:4292815:4336653433665343384221770Methylobacterium extorquens DM4, complete genomehypothetical protein2e-0861.2
NC_015675:4565500:4574488457448845754981011Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein2e-0860.8
NC_019673:8581000:8590587859058785916631077Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0860.5
NC_000914:198000:2073162073162085571242Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceY4jS3e-0860.5
NC_015634:359500:3898123898123909571146Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein4e-0859.7
NC_019012:61360:7747877478787191242Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequencehypothetical protein8e-0858.9
NC_015635:5511994:552894255289425529649708Microlunatus phosphovorus NM-1, complete genomehypothetical protein9e-0858.5
NC_013062:627000:6408576408576420351179Flavobacteriaceae bacterium 3519-10, complete genomehypothetical protein1e-0758.5
NC_015977:2874000:288420028842002885015816Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-0758.2
NC_016109:3591401:3656190365619036589432754Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0757.8
NC_009953:2342500:2357678235767823588321155Salinispora arenicola CNS-205 chromosome, complete genomepurine phosphorylase family 12e-0757.8
NC_013947:4695000:470183047018304702765936Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-0757.8
NC_013929:3206688:320993532099353210792858Streptomyces scabiei 87.22 chromosome, complete genomephosphorylase4e-0756.6
NC_010803:1436397:1449187144918714508301644Chlorobium limicola DSM 245, complete genomeNucleoside phosphorylase-like protein5e-0756.2
NC_014540:2933853:2959518295951829611701653Burkholderia sp. CCGE1003 chromosome 2, complete sequencehypothetical protein5e-0756.2
NC_018012:1628364:1635135163513516390073873Thiocystis violascens DSM 198 chromosome, complete genomenucleoside phosphorylase6e-0756.2
NC_015660:1896904:1904144190414419052471104Geobacillus thermoglucosidasius C56-YS93 chromosome, completeHNH nuclease1e-0655.1
NC_014650:1862165:1880695188069518817981104Geobacillus sp. Y4.1MC1 chromosome, complete genomeHNH nuclease1e-0655.1
NC_012808:1122341:1135482113548211367081227Methylobacterium extorquens AM1, complete genomehypothetical protein1e-0655.1
NC_015942:2293455:2307439230743923087131275Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein1e-0655.1
NC_009480:2580429:259526325952632596027765Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative endonuclease1e-0654.7
NC_006361:4574536:458220845822084583083876Nocardia farcinica IFM 10152, complete genomehypothetical protein3e-0653.9
NC_010634:4463727:4479341447934144809301590Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-0653.5
NC_011728:376375:384785384785385498714Borrelia burgdorferi ZS7, complete genomenucleosidase, Pfs protein4e-0653.1
NC_001318:377039:385449385449386162714Borrelia burgdorferi B31, complete genomepfs protein (pfs-1)5e-0653.1
NC_015942:2544407:255365225536522554440789Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein7e-0652.4