Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:3206688 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
320668832085771890two-component sensor kinaseQuickGO ontologyBLASTP
32085743209257684two-component response regulatorQuickGO ontologyBLASTP
32092673209848582hypothetical proteinBLASTP
32099353210792858phosphorylaseQuickGO ontologyBLASTP
321090232128271926AfsR family transcriptional regulatorQuickGO ontologyBLASTP
321289532143041410extracellular solute-binding lipoproteinQuickGO ontologyBLASTP
32143303215208879ABC transporterQuickGO ontologyBLASTP
32152143216038825ABC transporterQuickGO ontologyBLASTP
321605432184832430AfsR family transcriptional regulatorQuickGO ontologyBLASTP
32185353219407873phosphorylaseQuickGO ontologyBLASTP
321958932214991911AfsR family transcriptional regulatorQuickGO ontologyBLASTP
32214333221999567hypothetical proteinBLASTP
32221073222886780hypothetical protein
3222935322396010266-phosphofructokinaseQuickGO ontologyBLASTP
322423932263442106phosphate acetyltransferaseQuickGO ontologyBLASTP
322634132275701230acetate kinaseQuickGO ontologyBLASTP