Pre_GI: BLASTP Hits

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Query: NC_004463:2158116:2178419 Bradyrhizobium japonicum USDA 110, complete genome

Start: 2178419, End: 2179081, Length: 663

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017249:7993713:810000081000008100398399Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-70264
NC_007511:719493:7310787310787322771200Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein2e-2099.4
NC_011001:2517159:2520322252032225214401119Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid ABC transporter solute binding protein2e-2099.4
NC_010515:2358134:2372033237203323731511119Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-2099.4
NC_008543:2035292:2037685203768520388031119Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-2099.4
NC_010552:2089140:2092992209299220941101119Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-2099.4
NC_008061:428501:4408634408634419811119Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-2099.4
NC_011666:2259447:2259447225944722605651119Methylocella silvestris BL2, complete genomeExtracellular ligand-binding receptor3e-2098.6
NC_016745:675909:6971166971166982011086Oceanimonas sp. GK1 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein LivK1e-1996.3
NC_021066:1393750:1411247141124714123621116Raoultella ornithinolytica B6, complete genomeextracellular ligand-binding receptor7e-1994
NC_005773:694990:6977246977246988601137Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein1e-1892.8
NC_011742:3799788:3807332380733238084351104Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily4e-1891.7
NC_008563:3888232:3892584389258438937441161Escherichia coli APEC O1, complete genomeLeu/Ile/Val-binding protein precursor3e-1891.7
NC_007946:3855445:3859797385979738609571161Escherichia coli UTI89, complete genomeLeu/Ile/Val-binding protein precursor3e-1891.7
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor6e-1890.9
NC_015556:819503:8310258310258321461122Pseudomonas fulva 12-X chromosome, complete genomeExtracellular ligand-binding receptor1e-1789.7
NC_007946:3855445:3857693385769338588561164Escherichia coli UTI89, complete genomeleucine-specific binding protein precursor2e-1789.4
NC_011742:3799788:3805228380522838063371110Escherichia coli S88 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein2e-1789.4
NC_008563:3888232:3890480389048038915891110Escherichia coli APEC O1, complete genomeleucine transporter subunit2e-1789.4
NC_015224:279037:2812912812912825471257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched-chain amino acid-binding protein3e-1685.5
NC_010511:5169338:5171493517149351725931101Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor2e-1582
NC_003296:1980687:1996311199631119974531143Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE LEUCINE-SPECIFIC BINDING PRECURSOR TRANSMEMBRANE PROTEIN6e-1374.3
NC_010552:335989:3383023383023394531152Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor6e-1374.3
NC_014323:3976351:3980128398012839812701143Herbaspirillum seropedicae SmR1 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-1273.2
NC_008543:323773:3252703252703264301161Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-1271.6
NC_010557:679656:6890646890646901731110Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceExtracellular ligand-binding receptor1e-1067
NC_010805:575709:5947735947735959211149Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system substrate-binding protein9e-1167
NC_010086:1816378:1879383187938318805311149Burkholderia multivorans ATCC 17616 chromosome 2, completeExtracellular ligand-binding receptor9e-1167
NC_009255:1105786:1143156114315611443041149Burkholderia vietnamiensis G4 chromosome 2, complete sequenceextracellular ligand-binding receptor9e-1167
NC_008702:4064470:4084668408466840857921125Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein5e-1064.3
NC_012791:2233098:2243498224349822446401143Variovorax paradoxus S110 chromosome 1, complete genomeExtracellular ligand-binding receptor6e-1064.3
NC_008702:4064470:4086174408617440872891116Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein7e-1063.9
NC_008825:2063990:2076133207613320772601128Methylibium petroleiphilum PM1, complete genomeputative secreted substrate binding protein1e-0963.2
NC_010681:74587:7995179951811291179Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor1e-0860.1
NC_013895:1282566:1295398129539812965551158Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completereceptor family ligand-binding protein1e-0860.1
NC_015138:2025000:2036773203677320379121140Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeextracellular ligand-binding receptor2e-0858.9
NC_016002:2652500:2665852266585226670001149Pseudogulbenkiania sp. NH8B, complete genomeextracellular ligand-binding receptor3e-0858.5
NC_010681:1234500:1249047124904712502101164Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor8e-0857
NC_010676:2658495:2672337267233726734791143Burkholderia phytofirmans PsJN chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-0755.1
NC_015318:1583839:1594624159462415957661143Hippea maritima DSM 10411 chromosome, complete genomeExtracellular ligand-binding receptor8e-0753.9
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein1e-0653.1
NC_016625:171341:2005792005792017031125Burkholderia sp. YI23 chromosome 2, complete sequenceextracellular ligand-binding receptor2e-0652.8
NC_008751:2774000:2794966279496627960841119Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeExtracellular ligand-binding receptor7e-0650.8
NC_002937:614000:6169966169966181141119Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein7e-0650.8