Pre_GI: BLASTP Hits

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Query: NC_004432:1225077:1232950 Mycoplasma penetrans HF-2, complete genome

Start: 1232950, End: 1233129, Length: 180

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014921:777047:794684794684794884201Mycoplasma fermentans M64 chromosome, complete genome50S ribosomal protein l326e-0959.7
NC_014624:2668157:268228326822832682459177Eubacterium limosum KIST612 chromosome, complete genomeprotein RpmF9e-0958.9
NC_011025:361533:368248368248368445198Mycoplasma arthritidis 158L3-1, complete genomeribosomal protein L321e-0858.9
NC_005957:3746891:376677737667773767055279Bacillus thuringiensis serovar konkukian str. 97-27, complete50S ribosomal protein L325e-0856.6
NC_006274:3805134:382504838250483825326279Bacillus cereus E33L, complete genome50S ribosomal protein L325e-0856.6
NC_005945:3725397:374530637453063745584279Bacillus anthracis str. Sterne, complete genome50S ribosomal protein L325e-0856.6
NC_014844:3015738:303451030345103034689180Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome50S ribosomal protein L326e-0856.2
NC_015185:875324:891504891504891683180Desulfurobacterium thermolithotrophum DSM 11699 chromosome,50S ribosomal protein L328e-0855.8
NC_003997:3724702:374480637448063744979174Bacillus anthracis str. Ames, complete genome50S ribosomal protein L328e-0855.8
NC_007530:3724829:374493337449333745106174Bacillus anthracis str. 'Ames Ancestor', complete genome50S ribosomal protein L328e-0855.8
NC_014335:3675456:369537436953743695547174Bacillus cereus biovar anthracis str. CI chromosome, complete50S ribosomal protein L328e-0855.8
NC_012659:3724729:374483337448333745006174Bacillus anthracis str. A0248, complete genome50S ribosomal protein L328e-0855.8
NC_014171:3812247:382962438296243829797174Bacillus thuringiensis BMB171 chromosome, complete genome50S ribosomal protein L32P8e-0855.8
NC_016771:3665773:368560536856053685778174Bacillus cereus NC7401, complete genome50S ribosomal protein L328e-0855.8
NC_014831:1140356:115379211537921153971180Thermaerobacter marianensis DSM 12885 chromosome, complete genomeLSU ribosomal protein L32P1e-0755.5
NC_014622:2114244:212501221250122125185174Paenibacillus polymyxa SC2 chromosome, complete genome50S ribosomal protein L321e-0755.1
NC_014483:1954856:196560619656061965779174Paenibacillus polymyxa E681 chromosome, complete genome50S ribosomal protein L321e-0755.1
NC_007498:1666242:168142916814291681605177Pelobacter carbinolicus DSM 2380, complete genomeribosomal protein L322e-0754.7
NC_004461:813748:818938818938819111174Staphylococcus epidermidis ATCC 12228, complete genome50S ribosomal protein L322e-0754.7
NC_002976:707827:713016713016713189174Staphylococcus epidermidis RP62A, complete genome50S ribosomal protein L322e-0754.7
NC_004668:1010610:101336710133671013546180Enterococcus faecalis V583, complete genome50S ribosomal protein L323e-0753.9
NC_015958:1422319:143556414355641435746183Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome50S ribosomal protein L325e-0753.1
NC_011661:961129:969589969589969780192Dictyoglomus turgidum DSM 6724, complete genomeribosomal protein L329e-0752.4
NC_014964:1309845:132374613237461323928183Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete50S ribosomal protein L322e-0651.6
NC_007517:1792000:179882717988271799009183Geobacter metallireducens GS-15, complete genomeribosomal protein S321e-0651.6
NC_015738:1858455:187699018769901877169180Eggerthella sp. YY7918, complete genome50S ribosomal protein L322e-0651.2
NC_011297:787932:798740798740798931192Dictyoglomus thermophilum H-6-12, complete genomeribosomal protein L323e-0650.8
NC_016048:1930089:196110019611001961303204Oscillibacter valericigenes Sjm18-20, complete genome50S ribosomal protein L323e-0650.4
NC_013939:148706:153521153521153703183Deferribacter desulfuricans SSM1, complete genome50S ribosomal protein L324e-0650.1
NC_014933:270000:277244277244277429186Bacteroides helcogenes P 36-108 chromosome, complete genomeLSU ribosomal protein L32P7e-0649.3
NC_004663:4977635:498939049893904989575186Bacteroides thetaiotaomicron VPI-5482, complete genome50S ribosomal protein L32 (Ribosomal protein I)7e-0649.3