Pre_GI: BLASTP Hits

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Query: NC_004431:1119700:1140813 Escherichia coli CFT073, complete genome

Start: 1140813, End: 1141064, Length: 252

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (CFT073; O6:K2:H1) is uropathogenic E. coli (UPEC) one of the most common causes of non-hospital-acquired urinary tract infections. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3884725:390673339067333907542810Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeaga operon transcriptional repressor5e-29125
NC_004741:3240909:325951732595173260341825Shigella flexneri 2a str. 2457T, complete genomeputative DEOR-type transcriptional regulator of aga operon6e-29125
NC_004337:3249791:326839932683993269223825Shigella flexneri 2a str. 301, complete genomeputative DEOR-type transcriptional regulator of aga operon6e-29125
NC_017328:3289853:330846233084623309286825Shigella flexneri 2002017 chromosome, complete genomeputative DEOR-type transcriptional regulator of aga operon6e-29125
NC_000913:3256307:327587832758783276687810Escherichia coli K12, complete genomeDNA-binding transcriptional dual regulator5e-29125
NC_011750:3768692:379070037907003791509810Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator AgaR5e-29125
NC_002695:3994970:401709140170914017900810Escherichia coli O157:H7 str. Sakai, complete genometranscriptional repressor of aga operon5e-29125
CP002185:3475991:349556034955603496369810Escherichia coli W, complete genomeDNA-binding transcriptional dual regulator5e-29125
NC_012967:3191319:321078432107843211593810Escherichia coli B str. REL606 chromosome, complete genomeDNA-binding transcriptional regulator AgaR5e-29125
NC_012759:3143455:316302631630263163835810Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional regulator AgaR5e-29125
NC_011415:3523364:354566035456603546469810Escherichia coli SE11 chromosome, complete genomeDNA-binding transcriptional regulator AgaR5e-29125
AC_000091:3258377:327771132777113278520810Escherichia coli W3110 DNA, complete genomeDNA-binding transcriptional dual regulator5e-29125
NC_010473:3354052:337362333736233374432810Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional dual regulator5e-29125
NC_010498:3488513:350769235076923508501810Escherichia coli SMS-3-5, complete genomeDeoR family transcriptional regulator1e-28124
NC_011751:3710786:373279637327963733605810Escherichia coli UMN026 chromosome, complete genomeDNA-binding transcriptional regulator AgaR1e-28124
NC_009801:3595001:361273336127333613542810Escherichia coli E24377A, complete genometranscriptional regulator, DeoR family2e-28124
NC_012962:869295:878857878857879630774Photorhabdus asymbiotica, complete genomeputative aga operon transcriptional repressor of sugar metabolism6e-0753.1
NC_014618:586240:586240586240587010771Enterobacter cloacae SCF1 chromosome, complete genomeDeoR family transcriptional regulator1e-0652