Pre_GI: BLASTP Hits

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Query: NC_004337:3590323:3735644 Shigella flexneri 2a str. 301, complete genome

Start: 3735644, End: 3736252, Length: 609

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:119935:141669141669142277609Escherichia coli KO11FL chromosome, complete genomeglutathione S-transferase6e-114409
CU928145:4131924:413192441319244132532609Escherichia coli 55989 chromosome, complete genomeputative glutathione S-transferase6e-114409
NC_009801:4073968:407396840739684074576609Escherichia coli E24377A, complete genomeglutathione S-transferase6e-114409
NC_009800:3787320:379065037906503791258609Escherichia coli HS, complete genomeglutathione S-transferase6e-114409
NC_011748:4131924:413192441319244132532609Escherichia coli 55989, complete genomeputative glutathione S-transferase6e-114409
NC_010468:111504:132870132870133478609Escherichia coli ATCC 8739, complete genomeGlutathione S-transferase domain6e-114409
CP002516:119935:141669141669142277609Escherichia coli KO11, complete genomeGlutathione S-transferase domain protein6e-114409
NC_012947:126596:144528144528145136609Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeglutathione S-transferase6e-114409
NC_010498:3988351:399302339930233993631609Escherichia coli SMS-3-5, complete genomeglutathione S-transferase3e-113407
NC_013282:116649:135619135619136227609Cronobacter turicensis, complete genomeUncharacterized GST-like protein yibF4e-90330
NC_008702:369965:385249385249385866618Azoarcus sp. BH72, complete genomeconserved hypothetical glutathione S-transferase6e-44177
NC_008752:5213431:521343152134315214045615Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglutathione S-transferase, N-terminal domain1e-31136
NC_011992:3615517:361551736155173616131615Acidovorax ebreus TPSY, complete genomeGlutathione S-transferase domain protein2e-30132
NC_015677:3965716:396571639657163966330615Ramlibacter tataouinensis TTB310 chromosome, complete genomeglutathione S-transferase1e-29129
NC_015563:6357653:638188663818866382506621Delftia sp. Cs1-4 chromosome, complete genomeglutathione S-transferase domain-containing protein2e-29128
NC_014539:743523:747686747686748303618Burkholderia sp. CCGE1003 chromosome 1, complete sequenceglutathione S-transferase domain-containing protein7e-2097.1
NC_007925:1448726:146762314676231468237615Rhodopseudomonas palustris BisB18, complete genomeglutathione S-transferase-like2e-1789
NC_005296:4985991:498599149859914986608618Rhodopseudomonas palustris CGA009, complete genomeGlutathione S-transferase, N-terminal8e-1683.6
NC_011004:5283648:528364852836485284265618Rhodopseudomonas palustris TIE-1, complete genomeGlutathione S-transferase domain1e-1583.2
NC_007958:4541110:454203445420344542651618Rhodopseudomonas palustris BisB5, complete genomeglutathione S-transferase-like7e-1580.5
NC_004463:1520303:154076615407661541395630Bradyrhizobium japonicum USDA 110, complete genomehypothetical glutathione S-transferase like protein2e-1478.6
NC_008786:1332041:133915213391521339766615Verminephrobacter eiseniae EF01-2, complete genomeGlutathione S-transferase, N-terminal domain5e-1477.8
NC_008314:477722:523909523909524529621Ralstonia eutropha H16 chromosome 2, complete sequenceGlutathione S-transferase1e-1376.3
NC_016625:1259778:128209812820981282724627Burkholderia sp. YI23 chromosome 2, complete sequenceglutathione S-transferase2e-1168.6
NC_013166:242863:256171256171256764594Kangiella koreensis DSM 16069, complete genomeglutathione S-transferase domain protein2e-1065.5
NC_017030:6061070:608177760817776082436660Corallococcus coralloides DSM 2259 chromosome, complete genomeglutathione S-transferase3e-1064.7
NC_015856:764651:766923766923767534612Collimonas fungivorans Ter331 chromosome, complete genomestringent starvation protein A2e-0962.4
NC_011992:773905:783569783569784180612Acidovorax ebreus TPSY, complete genomeGlutathione S-transferase domain protein4e-0961.6
NC_014323:4619344:464292846429284643539612Herbaspirillum seropedicae SmR1 chromosome, complete genomestringent starvation transcription regulator A protein6e-0960.8
NC_006350:3710641:372554737255473726158612Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative stringent starvation protein A2e-0858.9
NC_009074:3559211:357465935746593575270612Burkholderia pseudomallei 668 chromosome I, complete sequencestringent starvation protein A2e-0858.9
NC_014307:533975:541148541148541759612Ralstonia solanacearum CFBP2957 chromosome, complete genomestringent starvation protein a, regulator of transcription3e-0858.5
NC_010682:3313944:335182233518223352433612Ralstonia pickettii 12J chromosome 1, complete sequenceGlutathione S-transferase domain4e-0858.2
NC_012856:3000839:301326730132673013878612Ralstonia pickettii 12D chromosome 1, complete genomeGlutathione S-transferase domain protein4e-0858.2
NC_015381:429940:436557436557437168612Burkholderia gladioli BSR3 chromosome 1, complete sequenceglutathione S-transferase4e-0858.2
NC_012724:359444:365613365613366224612Burkholderia glumae BGR1 chromosome 1, complete genomeGlutathione S-transferase4e-0858.2
NC_011894:4360577:436684543668454367453609Methylobacterium nodulans ORS 2060, complete genomeGlutathione S-transferase domain protein9e-0857
NC_010508:451184:457825457825458436612Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceGlutathione S-transferase domain8e-0857
NC_008060:2913671:293621029362102936821612Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceglutathione S-transferase-like8e-0857
NC_008542:483761:489824489824490435612Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceGlutathione S-transferase, N-terminal domain8e-0857
NC_015740:2692023:271514327151432715823681Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeglutathione S-transferase1e-0756.6
NC_015563:1240978:125991512599151260526612Delftia sp. Cs1-4 chromosome, complete genomeglutathione S-transferase domain-containing protein2e-0755.8
NC_010002:6104500:610514561051456105756612Delftia acidovorans SPH-1, complete genomeGlutathione S-transferase domain2e-0755.8
NC_015593:2271097:227702522770252277711687Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeglutathione S-transferase domain-containing protein5e-0754.3
NC_007492:3801237:380735438073543807959606Pseudomonas fluorescens PfO-1, complete genomeGlutathione S-transferase-like9e-0753.5
NC_015731:3274739:329524432952443295843600Nitrosomonas sp. Is79A3 chromosome, complete genomeGlutathione S-transferase domain-containing protein3e-0652
NC_008758:143907:145791145791146423633Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeGlutathione S-transferase, C-terminal domain3e-0652
NC_013446:3147202:317804531780453178689645Comamonas testosteroni CNB-2, complete genomemaleylacetoacetate isomerase4e-0651.2
NC_014837:2758239:277062927706292771237609Pantoea sp. At-9b chromosome, complete genomeglutathione S-transferase domain-containing protein4e-0651.2