Pre_GI Gene

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Host: NC_011004 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011004:5283648 Rhodopseudomonas palustris TIE-1, complete genome

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52836485284265618Glutathione S-transferase domainQuickGO ontologyBLASTP
52842845284835552methylated-DNAprotein-cysteine methyltransferaseQuickGO ontologyBLASTP
52848795285427549hypothetical proteinBLASTP
528553952866841146PepSY-associated TM helix domain proteinQuickGO ontologyBLASTP
528668952890252337TonB-dependent siderophore receptorQuickGO ontologyBLASTP
52892115289795585hypothetical proteinBLASTP
529006952901821145S ribosomal RNAQuickGO ontologyBLASTP
52902465293072282723S ribosomal RNAQuickGO ontologyBLASTP
5293484529355976tRNA-AlaQuickGO ontologyBLASTP
5293593529366977tRNA-IleQuickGO ontology
52938875295368148216S ribosomal RNAQuickGO ontologyBLASTP
529634352983732031Peptidase M23QuickGO ontologyBLASTP
529852053001481629NHL repeat containing proteinQuickGO ontologyBLASTP
530042653030652640ATP-dependent chaperone ClpBQuickGO ontologyBLASTP
53032925304080789MOSC domain containing proteinQuickGO ontologyBLASTP
53042875305030744putative exported protein of unknown functionQuickGO ontologyBLASTP
53052525305947696methionine biosynthesis protein MetWQuickGO ontologyBLASTP
530595053071491200homoserine O-acetyltransferaseQuickGO ontologyBLASTP