Pre_GI: BLASTP Hits

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Query: NC_004337:3049118:3095337 Shigella flexneri 2a str. 301, complete genome

Start: 3095337, End: 3095810, Length: 474

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1984 from a patient in Beijing, China. It is similar to pathogenic Escherichia coli except for the more numerous insertion sequences and contains a virulence plasmid (pCP301). Causes enteric disease. Shigella This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:3088907:313497031349703135515546Shigella flexneri 2002017 chromosome, complete genomehypothetical protein8e-92335
NC_009801:4882684:488384448838444884317474Escherichia coli E24377A, complete genomeantirestriction protein2e-91333
NC_004741:3041294:308616430861643086637474Shigella flexneri 2a str. 2457T, complete genomehypothetical protein2e-91333
NC_007946:1119000:113791811379181138463546Escherichia coli UTI89, complete genomehypothetical protein YafX2e-89327
NC_011083:4547825:456746445674644567943480Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,antirestriction protein4e-83306
NC_008253:334467:356951356951357436486Escherichia coli 536, complete genomepossible anti-restriction protein1e-79295
NC_004431:4319152:433826543382654338750486Escherichia coli CFT073, complete genomeHypothetical protein yfjX7e-79291
NC_007946:4875997:489352248935224894007486Escherichia coli UTI89, complete genomehypothetical protein3e-78290
NC_011750:4390000:441135344113534411904552Escherichia coli IAI39 chromosome, complete genomeputative antirestriction protein1e-77288
NC_011745:5114500:511538051153805115865486Escherichia coli ED1a chromosome, complete genomeputative antirestriction protein (klcA-like)9e-77285
NC_008253:4817864:483406248340624834505444Escherichia coli 536, complete genomehypothetical protein2e-76283
NC_011745:3405520:342318234231823423667486Escherichia coli ED1a chromosome, complete genomeputative antirestriction protein (klcA-like)1e-74278
NC_013716:5201097:522261352226135223098486Citrobacter rodentium ICC168, complete genomeputative antirestriction protein2e-74277
NC_008253:3161311:317295931729593173444486Escherichia coli 536, complete genomehypothetical protein YfjX (possible anti-restriction protein)2e-73273
NC_013353:3669500:367058736705873671072486Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-73273
NC_011750:4775770:477626147762614776746486Escherichia coli IAI39 chromosome, complete genomeputative antirestriction protein4e-73273
AP010958:3669500:367058736705873671072486Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein4e-73273
NC_013361:3313284:332971733297173330202486Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-72271
NC_020181:5130513:513345751334575134008552Enterobacter aerogenes EA1509E, complete genomeAntirestriction protein klcA9e-61232
NC_015663:549425:563451563451563933483Enterobacter aerogenes KCTC 2190 chromosome, complete genomeantirestriction protein1e-59228
NC_016612:443398:456388456388456831444Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-58223
AC_000091:2747520:277457527745752775033459Escherichia coli W3110 DNA, complete genomepredicted antirestriction protein3e-58223
NC_000913:2746886:277394127739412774399459Escherichia coli K12, complete genomeCP4-57 prophage; predicted antirestriction protein3e-58223
NC_010473:2839902:286570628657062866164459Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted antirestriction protein3e-58223
NC_012759:2633949:265975326597532660211459Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage; putative antirestriction protein3e-58223
NC_014618:4114004:412067741206774121135459Enterobacter cloacae SCF1 chromosome, complete genomeantirestriction protein7e-58222
NC_011283:4966471:498501649850164985459444Klebsiella pneumoniae 342 chromosome, complete genomeantirestriction protein1e-57221
NC_016816:1137904:115013711501371150580444Pantoea ananatis LMG 5342, complete genomeantirestriction protein KlcA1e-56218
NC_014618:690056:722784722784723242459Enterobacter cloacae SCF1 chromosome, complete genomeantirestriction protein3e-56217
NC_011415:308825:326258326258326701444Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-56216
NC_010498:301000:316666316666317124459Escherichia coli SMS-3-5, complete genomeantirestriction protein4e-56216
NC_020064:3609844:363365836336583634101444Serratia marcescens FGI94, complete genomeAntirestriction protein5e-56216
AP010958:5272863:528831952883195288762444Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein2e-55214
NC_013353:5272863:528831952883195288762444Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein2e-55214
NC_014121:3776902:379175537917553792213459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-55214
NC_020260:882307:894452894452894910459Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-55214
NC_016612:2009927:204450420445042044950447Klebsiella oxytoca KCTC 1686 chromosome, complete genomeantirestriction protein3e-54210
NC_009832:1946401:194895619489561949414459Serratia proteamaculans 568, complete genomeAntirestriction protein1e-47188
NC_015663:1:322223222232515294Enterobacter aerogenes KCTC 2190 chromosome, complete genomeantirestriction protein2e-31134
NC_020418:116500:133892133892134317426Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-30132
NC_010170:4800000:480770448077044808117414Bordetella petrii, complete genomehypothetical protein yfjX3e-1167.4
NC_015663:1869000:187050918705091871129621Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-0961.2
NC_009668:445134:499390499390499812423Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceantirestriction protein1e-0858.9
NC_016845:4498097:450766945076694508067399Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-0858.9
NC_011747:11532:340733407334519447Escherichia coli S88 plasmid pECOS88, complete sequenceputative antirestriction protein7e-0753.1
NC_010488:48868:495114951149936426Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequenceputative antirestriction protein8e-0752.8