Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:195347:209336 Pseudomonas fluorescens Pf-5, complete genome

Start: 209336, End: 209620, Length: 285

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1518113:154983515498351550113279Pseudomonas putida F1, complete genomeprotein of unknown function DUF4971e-28124
NC_014355:2321957:232371623237162324006291Candidatus Nitrospira defluvii, complete genomehypothetical protein3e-1373.6
NC_011726:3205278:322844532284453228723279Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF4978e-1372.4
NC_011205:4761598:477517347751734775460288Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1065.1
NC_011274:4577402:459111745911174591404288Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1065.1
NC_011294:4604283:461786646178664618153288Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-1065.1
NC_016831:4556761:457047645704764570763288Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1065.1
NC_007650:1192310:121619712161971216466270Burkholderia thailandensis E264 chromosome II, complete sequencepANL561e-0961.6
NC_009483:936000:940304940304940570267Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein4e-0960.1
NC_009523:1025556:103423010342301034526297Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein4e-0857
NC_014364:2322269:235259123525912352845255Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF4975e-0856.6
NC_014364:4488875:450318745031874503441255Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF4974e-0856.6
NC_014972:210500:211140211140211412273Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein9e-0855.8
NC_009007:57804:666916669166981291Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceconserved hypothetical protein9e-0855.5
NC_018012:1326553:133548113354811335753273Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein2e-0754.7
NC_012560:3282704:329640632964063296675270Azotobacter vinelandii DJ, complete genomehypothetical protein2e-0754.7
NC_021150:3282702:329640432964043296673270Azotobacter vinelandii CA6, complete genomehypothetical protein2e-0754.7
NC_019940:866969:872795872795873088294Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein3e-0753.9
NC_011206:2040000:204975920497592050040282Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF4974e-0753.5
NC_011761:2131911:216171721617172161998282Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein4e-0753.5
NC_008751:1762562:178359817835981783867270Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF4974e-0753.5
NC_005125:1161000:118985711898571190162306Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-0753.5
NC_011979:3070110:308535630853563085640285Geobacter sp. FRC-32, complete genomeprotein of unknown function DUF4973e-0753.5
NC_010645:1496816:151532915153291515595267Bordetella avium 197N, complete genomephage protein5e-0753.1
NC_011206:1264639:127698412769841277265282Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF4975e-0753.1
NC_019940:3518670:353615035361503536419270Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein5e-0753.1
NC_011883:269497:280583280583280843261Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,protein of unknown function DUF4976e-0752.8
NC_007494:739403:743884743884744174291Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein7e-0752.8
NC_015581:1043394:105092910509291051207279Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein1e-0652
NC_010577:1188438:120994612099461210212267Xylella fastidiosa M23, complete genomeprotein of unknown function DUF4972e-0651.2
NC_004556:1178897:120040612004061200672267Xylella fastidiosa Temecula1, complete genomehypothetical protein2e-0651.2
NC_015224:2095816:209556320955632095835273Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-0651.2
NC_017265:2306500:231405023140502314322273Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-0650.4
NC_017168:3535786:353810735381073538379273Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-0650.4
NC_004088:2691565:269388626938862694158273Yersinia pestis KIM, complete genomehypothetical protein4e-0650.4
NC_008149:2517538:252903125290312529303273Yersinia pestis Nepal516, complete genomehypothetical protein4e-0650.4
NC_005810:1663672:166633116663311666603273Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-0650.4
NC_011420:2692857:271457227145722714883312Rhodospirillum centenum SW, complete genomehypothetical protein6e-0649.7
NC_017267:2698944:271519627151962715477282Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completepANL561e-0548.9
NC_014216:2127370:214369421436942143954261Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeprotein of unknown function DUF4971e-0548.9