Pre_GI: BLASTP Hits

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Query: NC_003198:1908238:1925628 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 1925628, End: 1925783, Length: 156

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:1419324:142456414245641424812249Escherichia coli E24377A, complete genomehypothetical protein1e-22105
NC_013361:2138716:216028221602822160593312Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-21101
CU928145:1773642:179448617944861794641156Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; Qin prophage4e-21100
NC_011748:1773642:179448617944861794641156Escherichia coli 55989, complete genomeconserved hypothetical protein; Qin prophage4e-21100
NC_009801:1756610:177291017729101773065156Escherichia coli E24377A, complete genomehypothetical protein4e-21100
NC_011751:1859606:188051318805131880824312Escherichia coli UMN026 chromosome, complete genomehypothetical protein5e-2199.8
NC_011601:1269500:127343412734341273682249Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-2199.8
NC_011741:1668842:169128216912821691515234Escherichia coli IAI1 chromosome, complete genomehypothetical protein7e-2199.4
CU928160:1668842:169128216912821691515234Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein from phage origin7e-2199.4
AC_000091:1627049:165022216502221650377156Escherichia coli W3110 DNA, complete genomehypothetical protein1e-2098.2
CP002185:1770815:179330417933041793459156Escherichia coli W, complete genomeQin prophage; hypothetical protein1e-2098.2
NC_010468:2265423:226931522693152269470156Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF13911e-2098.2
NC_010473:1712984:173615717361571736312156Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted protein1e-2098.2
CP002516:2305659:231239723123972312552156Escherichia coli KO11, complete genomeprotein of unknown function DUF13911e-2098.2
NC_000913:1625500:164653216465321646687156Escherichia coli K12, complete genomeQin prophage; predicted protein1e-2098.2
NC_012759:1517500:153859115385911538746156Escherichia coli BW2952 chromosome, complete genomeQin prophage protein1e-2098.2
NC_016902:2305659:231239723123972312552156Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-2098.2
CU928145:1408280:141374114137411414049309Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein3e-2097.1
NC_011748:1408280:141374114137411414049309Escherichia coli 55989, complete genomehypothetical protein3e-2097.1
AC_000091:1407693:142087014208701421025156Escherichia coli W3110 DNA, complete genomehypothetical protein1e-1995.1
NC_010473:1493983:150657615065761506731156Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted protein1e-1995.1
NC_000913:1404000:141718014171801417335156Escherichia coli K12, complete genomeRac prophage; predicted protein1e-1995.1
NC_011415:1472500:148258514825851482740156Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1995.1
NC_012759:1296000:130923913092391309394156Escherichia coli BW2952 chromosome, complete genomeRac prophage protein1e-1995.1
NC_012947:2366000:237940423794042379559156Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-1995.1
NC_012967:1403733:141632614163261416481156Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-1995.1
NC_016902:2580774:259850925985092598661153Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-1890.9
CP002516:2580774:259850925985092598661153Escherichia coli KO11, complete genomeprotein of unknown function DUF13912e-1890.9
CP002185:1493280:150718915071891507341153Escherichia coli W, complete genomeRac prophage; predicted protein2e-1890.9
NC_009800:1657550:167384516738451673955111Escherichia coli HS, complete genomehypothetical protein3e-1270.5