Pre_GI: BLASTP Hits

Some Help

Query: NC_003063:2059311:2068187 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Start: 2068187, End: 2069254, Length: 1068

Host Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003305:1:5502550265691068Agrobacterium tumefaciens str. C58 chromosome linear, completeexopolysaccharide production protein0662
NC_017986:4931104:4943412494341249444791068Pseudomonas putida ND6 chromosome, complete genomecapsular polysaccharide biosynthesis O-acetyl transferase2e-30133
NC_016935:976059:9854019854019864711071Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative acyltransferase2e-24113
NC_010002:3980832:398925539892553990184930Delftia acidovorans SPH-1, complete genomeacyltransferase 34e-24112
NC_010681:1325632:1334102133410213351661065Burkholderia phytofirmans PsJN chromosome 1, complete sequenceacyltransferase 37e-24111
NC_015733:2194676:2197245219724521982791035Pseudomonas putida S16 chromosome, complete genomeacyltransferase 34e-22105
NC_013971:1927510:1933974193397419349751002Erwinia amylovora ATCC 49946 chromosome, complete genomeacyltransferase5e-21102
NC_013961:1891000:1896447189644718974481002Erwinia amylovora, complete genomeO-acetyltransferase oatA5e-21102
NC_011094:2115750:2126118212611821272511134Salmonella enterica subsp. enterica serovar Schwarzengrund stracetyltransferase family protein2e-1997.1
NC_010102:931055:9408779408779420101134Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1997.1
NC_011004:4045277:4050966405096640521021137Rhodopseudomonas palustris TIE-1, complete genomeacyltransferase 39e-1994.7
NC_013850:1658010:1676382167638216774161035Klebsiella variicola At-22 chromosome, complete genomeacyltransferase 32e-1893.6
NC_013361:3254000:3265767326576732669091143Escherichia coli O26:H11 str. 11368 chromosome, complete genomeacyltransferase3e-1893.2
NC_005296:3783348:3789036378903637901721137Rhodopseudomonas palustris CGA009, complete genomeputative exopolysaccharide biosynthesis protein9e-1891.3
NC_011894:6888562:6941428694142869425581131Methylobacterium nodulans ORS 2060, complete genomeacyltransferase 32e-1790.1
NC_013282:2582720:2593483259348325946101128Cronobacter turicensis, complete genomehypothetical protein7e-1788.2
NC_012214:1974500:2002008200200820031231116Erwinia pyrifoliae Ep1/96, complete genomeAcetyltransferase family protein1e-1687.4
NC_008781:3365468:3376984337698433780721089Polaromonas naphthalenivorans CJ2, complete genomeacyltransferase 35e-1685.5
NC_017082:5844708:5854955585495558560371083Bradyrhizobium sp. S23321, complete genomeputative acyltransferase4e-1582.8
NC_014394:1373602:1392911139291113939691059Gallionella capsiferriformans ES-2 chromosome, complete genomeacyltransferase 32e-1480.5
NC_008435:1215437:1265110126511012661771068Rhodopseudomonas palustris BisA53, complete genomeacyltransferase 32e-1480.5
NC_002678:6608697:6614371661437166154561086Mesorhizobium loti MAFF303099, complete genomesimilar to EXOPOLYSACCHARIDE PRODUCTION PROTEIN EXOZ3e-1479.7
NC_013416:1621469:1631551163155116325851035Aggregatibacter actinomycetemcomitans D11S-1, complete genomeexopolysaccharide production protein EXOZ1e-1377.8
NC_011601:2806392:2815452281545228165251074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeacyltransferase2e-1377
NC_009439:4661102:4678369467836946795081140Pseudomonas mendocina ymp, complete genomeacyltransferase 34e-1375.9
NC_015761:520858:5309695309695320271059Salmonella bongori NCTC 12419, complete genomeacyltransferase5e-1375.9
NC_008260:1015447:1020004102000410210321029Alcanivorax borkumensis SK2, complete genomeacetyltransferase, putative7e-1272
NC_012214:1974500:200383220038322004677846Erwinia pyrifoliae Ep1/96, complete genomePutative exopolysaccharide production protein ExoZ2e-1170.5
NC_008435:1215437:126913212691321270130999Rhodopseudomonas palustris BisA53, complete genomeacyltransferase 36e-1168.9
NC_013929:3953046:3955351395535139565231173Streptomyces scabiei 87.22 chromosome, complete genomemembrane-bound acyltransferase2e-1067.4
NC_014414:1321963:1326836132683613279811146Parvularcula bermudensis HTCC2503 chromosome, complete genomeAcyltransferase 3 family protein2e-1067
NC_012967:786534:7981307981307992751146Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein4e-1065.9
NC_007953:1434705:1455336145533614564601125Burkholderia xenovorans LB400 chromosome 3, complete sequenceputative acyltransferase transmembrane protein6e-1065.5
NC_015968:2845751:2859517285951728606201104Enterobacter asburiae LF7a chromosome, complete genomeacyltransferase 37e-1065.1
NC_013364:2612822:261800426180042618912909Escherichia coli O111:H- str. 11128, complete genome3e-0963.2
NC_016147:307275:3174103174103187981389Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeacyltransferase 35e-0962.4
NC_017082:6687020:669717766971776697971795Bradyrhizobium sp. S23321, complete genomehypothetical protein4e-0859.3
NC_012125:1360593:1371695137169513729481254Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0859.3
NC_011886:2950411:2958543295854329596191077Arthrobacter chlorophenolicus A6, complete genomeacyltransferase 35e-0858.9
NC_016818:2836851:2846308284630828474021095Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative acyltransferase8e-0858.2
NC_014816:2357000:2379464237946423805311068Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceacyltransferase 31e-0654.7
NC_019892:6825739:6832833683283368340411209Singulisphaera acidiphila DSM 18658 chromosome, complete genomeacyltransferase3e-0653.1
NC_014623:659422:6746726746726757211050Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeacyltransferase 3 domain-containing protein6e-0652
NC_008639:2968000:2991166299116629929771812Chlorobium phaeobacteroides DSM 266, complete genomeacyltransferase 38e-0651.6
NC_011769:3401353:3412438341243834135291092Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeacyltransferase 39e-0651.6