Pre_GI: BLASTP Hits

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Query: NC_003063:1019674:1035869 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Start: 1035869, End: 1036999, Length: 1131

Host Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003305:1035342:1037757103775710390161260Agrobacterium tumefaciens str. C58 chromosome linear, completeimidazolonepropionase0741
NC_008254:3246306:3246306324630632475591254Mesorhizobium sp. BNC1, complete genomeimidazolonepropionase2e-160565
NC_014532:1713987:1718351171835117195771227Halomonas elongata DSM 2581, complete genomeimidazolonepropionase6e-104377
NC_006677:1255079:1269113126911312703511239Gluconobacter oxydans 621H, complete genomeImidazolonepropionase2e-99363
NC_010694:2492378:2505867250586725070841218Erwinia tasmaniensis, complete genomeImidazolonepropionase3e-98358
NC_014551:3797047:3817337381733738186021266Bacillus amyloliquefaciens DSM 7, complete genomeimidazolone-5-propionate hydrolase2e-72273
NC_017190:3812065:3832359383235938336241266Bacillus amyloliquefaciens LL3 chromosome, complete genomeimidazolone-5-propionate hydrolase2e-72273
NC_017188:3764061:3785538378553837868031266Bacillus amyloliquefaciens TA208 chromosome, complete genomeimidazolonepropionase1e-72273
NC_017191:3766960:3787230378723037884951266Bacillus amyloliquefaciens XH7 chromosome, complete genomeimidazolonepropionase1e-72273
NC_015571:1495286:1500510150051015017811272Porphyromonas gingivalis TDC60, complete genomeimidazolonepropionase1e-68260
NC_002950:353549:3622453622453635161272Porphyromonas gingivalis W83, complete genomeimidazolonepropionase2e-68259
NC_010729:1818500:1828447182844718297181272Porphyromonas gingivalis ATCC 33277, complete genomeimidazolonepropionase3e-68259
NC_018515:4196409:4208204420820442094601257Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeimidazolonepropionase8e-67254
NC_013939:913890:9378079378079390451239Deferribacter desulfuricans SSM1, complete genomeimidazolonepropionase4e-66252
NC_011999:1567818:1575683157568315769301248Macrococcus caseolyticus JCSC5402, complete genomeimidazolonepropionase9e-66251
NC_014328:2326930:2339466233946623407191254Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeimidazolonepropionase6e-65248
NC_007296:1762000:1765072176507217663581287Streptococcus pyogenes MGAS6180, complete genomeimidazolonepropionase3e-64246
NC_009615:4425500:4455384445538444566341251Parabacteroides distasonis ATCC 8503 chromosome, complete genomeimidazolonepropionase2e-64246
NC_015638:2588954:2609113260911326103481236Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeImidazolonepropionase2e-62240
NC_016779:3418538:3423556342355634248271272Bacillus cereus F837/76 chromosome, complete genomeImidazolonepropionase2e-62239
NC_012581:803456:8258658258658271361272Bacillus anthracis str. CDC 684 chromosome, complete genomeimidazolonepropionase2e-62239
NC_010718:3039434:3045893304589330471641272Natranaerobius thermophilus JW/NM-WN-LF, complete genomeimidazolonepropionase4e-62238
NC_017347:2437902:2449289244928924505271239Staphylococcus aureus subsp. aureus T0131 chromosome, completeImidazolonepropionase3e-59229
NC_015318:1583839:1591328159132815925781251Hippea maritima DSM 10411 chromosome, complete genomeImidazolonepropionase8e-59228
NC_011758:326366:3334943334943347261233Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeimidazolonepropionase6e-59228
NC_009376:1335074:1341496134149613426831188Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeimidazolonepropionase2e-49196
NC_016885:603269:6135776135776147641188Pyrobaculum oguniense TE7 chromosome, complete genomeimidazolonepropionase2e-49196
NC_013744:349297:3690483690483703311284Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeimidazolonepropionase1e-47191
NC_016803:3502749:3512807351280735140601254Desulfovibrio desulfuricans ND132 chromosome, complete genomeimidazolonepropionase3e-46186
NC_010617:2626000:2627822262782226289971176Kocuria rhizophila DC2201, complete genomeimidazolonepropionase1e-40167
NC_008536:5192235:5199454519945452006561203Solibacter usitatus Ellin6076, complete genomeimidazolonepropionase2e-31136
NC_012029:45462:6423164231655651335Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeamidohydrolase2e-0757