Pre_GI: BLASTP Hits

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Query: NC_002937:2068117:2138236 Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete

Start: 2138236, End: 2141694, Length: 3459

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from clay soil near Hildenborough, UK in 1946. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014844:2028666:2049096204909620522633168Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeUvrD/REP helicase2e-157557
NC_020409:297258:2972582972583004043147Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeUvrD/REP helicase3e-157556
NC_015682:150808:1749901749901773082319Thermodesulfobacterium sp. OPB45 chromosome, complete genomeUvrD/REP helicase4e-37157
NC_015571:2273503:2285868228586822890923225Porphyromonas gingivalis TDC60, complete genomeUvrD/REP helicase domain-containing protein4e-35150
NC_015160:797780:7977807977808009443165Odoribacter splanchnicus DSM 20712 chromosome, complete genomeUvrD/REP helicase1e-33145
NC_014933:3015678:3025455302545530287693315Bacteroides helcogenes P 36-108 chromosome, complete genomeUvrD/REP helicase1e-27126
NC_019978:1066000:1076331107633110794143084Halobacteroides halobius DSM 5150, complete genomeATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing9e-24113
NC_021171:2562000:2569926256992625731923267Bacillus sp. 1NLA3E, complete genomeUvrD/REP helicase5e-1584.3
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase1e-1483.2
NC_013520:1905554:1912628191262819164943867Veillonella parvula DSM 2008, complete genomerecombination helicase AddA7e-1480.5
NC_009952:3596399:3620154362015436235313378Dinoroseobacter shibae DFL 12, complete genomedouble-strand break repair helicase AddA2e-1275.5
NC_011725:1150779:1162548116254811662733726Bacillus cereus B4264 chromosome, complete genomeATP-dependent nuclease subunit A2e-1275.5
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA3e-1275.1
NC_004722:1108649:1120491112049111242163726Bacillus cereus ATCC 14579, complete genomeATP-dependent nuclease subunit A3e-1275.1
NC_014171:1118000:1128345112834511320703726Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent nuclease subunit A3e-1275.1
NC_005945:1103729:1115543111554311192683726Bacillus anthracis str. Sterne, complete genomeATP-dependent nuclease, subunit A3e-1275.1
NC_012659:1103737:1115551111555111192763726Bacillus anthracis str. A0248, complete genomeATP-dependent nuclease, subunit A3e-1275.1
NC_014335:1094000:1105302110530211090273726Bacillus cereus biovar anthracis str. CI chromosome, completeATP-dependent nuclease subunit A4e-1274.7
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase7e-1273.9
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase8e-1273.6
NC_015067:1528984:1554473155447315585884116Bifidobacterium longum subsp. longum JCM 1217, complete genomeATP-dependent nuclease subunit A1e-1173.6
NC_003909:1244000:1254852125485212585773726Bacillus cereus ATCC 10987, complete genomeATP-dependent nuclease, subunit A2e-1172.8
NC_011969:1181302:1191830119183011955553726Bacillus cereus Q1 chromosome, complete genomeATP-dependent nuclease, subunit a1e-1172.8
NC_017208:1147230:1159040115904011627653726Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent nuclease subunit A2e-1172.4
NC_002696:3759551:3785717378571737893283612Caulobacter crescentus CB15, complete genomehelicase, UvrD/Rep family2e-1172.4
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase2e-1172.4
NC_011772:1094534:1106450110645011101753726Bacillus cereus G9842, complete genomeATP-dependent nuclease, subunit A6e-1170.9
NC_009465:90000:9221992219953893171Candidatus Vesicomyosocius okutanii HA, complete genomeATP-dependent DNA helicase1e-0863.5
NC_009053:393700:4160344160344196423609Actinobacillus pleuropneumoniae L20, complete genomeexodeoxyribonuclease V beta chain8e-0963.5
NC_015574:868000:8875628875628899192358Methanobacterium sp. SWAN-1 chromosome, complete genomeUvrD/REP helicase1e-0862.8
NC_010184:1114000:1121749112174911254743726Bacillus weihenstephanensis KBAB4, complete genomeRecombination helicase AddA1e-0862.8
NC_010939:405477:4438164438164474243609Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeexodeoxyribonuclease V beta chain3e-0862
NC_010278:398521:4207614207614243693609Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,exodeoxyribonuclease V subunit beta3e-0861.6
NC_015388:269301:2693012693012727143414Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeUvrD/REP helicase5e-0861.2
NC_009785:1443500:1456866145686614605163651Streptococcus gordonii str. Challis substr. CH1, complete genomefirst chain of major exonuclease RexA1e-0759.7
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II2e-0759.3
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase2e-0759.3
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase2e-0759.3
NC_019814:320260:3202603202603236193360Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein2e-0758.9
NC_002947:4167500:4184219418421941858771659Pseudomonas putida KT2440, complete genomehelicase, putative4e-0758.2
NC_015859:1069116:1089451108945110925733123Corynebacterium variabile DSM 44702 chromosome, complete genomeATP-dependent DNA helicase II1e-0656.2
NC_014924:3334386:3354099335409933577163618Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, beta subunit1e-0656.2
NC_015556:130437:1304371304371326382202Pseudomonas fulva 12-X chromosome, complete genomeUvrD/REP helicase3e-0655.5
NC_014622:3819495:3827329382732938313484020Paenibacillus polymyxa SC2 chromosome, complete genomerecombination helicase adda3e-0655.1