Pre_GI: BLASTP Hits

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Query: NC_001263:243000:263536 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 263536, End: 264567, Length: 1032

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013946:415028:4411734411734422551083Meiothermus ruber DSM 1279 chromosome, complete genomeABC transporter periplasmic binding protein, thiB subfamily4e-86318
NC_012108:2542328:2561377256137725625101134Desulfobacterium autotrophicum HRM2, complete genomeTbpA4e-65248
NC_003888:6103534:6144349614434961454701122Streptomyces coelicolor A3(2), complete genomesolute binding lipoprotein1e-57224
NC_013174:309943:3346553346553357461092Jonesia denitrificans DSM 20603, complete genomeABC transporter, periplasmic binding protein, thiB subfamily1e-56220
NC_015680:930483:9469259469259479681044Pyrococcus yayanosii CH1 chromosome, complete genomethiamine-binding periplasmic protein2e-49196
NC_016751:1776669:179397517939751794946972Marinitoga piezophila KA3 chromosome, complete genomeABC transporter substrate-binding protein4e-33142
NC_012912:647369:665383665383666366984Dickeya zeae Ech1591, complete genomethiamine ABC transporter, periplasmic binding protein5e-30132
NC_014774:1210004:4228422852291002Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completethiamine transporter substrate binding subunit2e-24113
NC_008740:1357312:1362512136251213635161005Marinobacter aquaeolei VT8, complete genomeABC transporter, periplasmic binding protein, thiB subfamily1e-22107
NC_013158:363222:3797053797053808711167Halorhabdus utahensis DSM 12940, complete genomeABC transporter, periplasmic binding protein, thiB subfamily5e-1995.5
NC_009012:1901492:1919023191902319201291107Clostridium thermocellum ATCC 27405, complete genomeextracellular solute-binding protein, family 16e-1478.6
NC_014364:1990000:2000764200076420018251062Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 17e-1272
NC_014166:2649444:2664773266477326657801008Arcobacter nitrofigilis DSM 7299 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1169.7
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 11e-1067.8
NS_000195:1257834:1279723127972312807781056Candidatus Cloacamonas acidaminovoranshypothetical protein4e-1065.9
NC_010519:1684901:1699468169946817004841017Haemophilus somnus 2336 chromosome, complete genomethiamine ABC transporter periplasmic binding protein6e-1065.1
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)5e-0858.9
NC_013446:4723380:4749627474962747506761050Comamonas testosteroni CNB-2, complete genomeperiplasmic iron binding protein9e-0858.2
NC_017297:1280963:129455712945571295387831Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter substrate-binding protein3e-0756.6
NC_007948:4646344:4656182465618246572251044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 13e-0756.6
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein3e-0756.2
NC_015376:965000:9682399682399692551017Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding family protein 153e-0756.2
NC_016935:4326644:4347412434741243485181107Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0755.8
NC_015690:4592582:4607271460727146083771107Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-0755.8
NC_007604:1442500:1460847146084714618691023Synechococcus elongatus PCC 7942, complete genomeiron transport system substrate-binding protein5e-0755.5
NC_017179:3222015:3226058322605832271071050Clostridium difficile BI1, complete genomeABC transporter substrate-binding protein2e-0653.9
NC_013315:3214063:3218106321810632192271122Clostridium difficile CD196 chromosome, complete genomeABC transporter substrate-binding protein2e-0653.9
NC_011313:871445:8886868886868897411056Aliivibrio salmonicida LFI1238 chromosome 2, complete sequenceextracellular solute-binding protein2e-0653.5
NC_006510:2044347:2055331205533120564371107Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)7e-0652
NC_015381:1318818:1321712132171213227671056Burkholderia gladioli BSR3 chromosome 1, complete sequenceextracellular solute-binding protein7e-0651.6