Pre_GI: OUP Neighbours

Some Help

Query: NC_011660:724711 Listeria monocytogenes HCC23 chromosome, complete genome

D: 22.6167

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.

Number of Neighbours: 29




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genome82.3346 %Subject ←→ Query20.0663
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genome84.0441 %Subject ←→ Query21.6318
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genome77.3223 %Subject ←→ Query21.9417
NC_013766:1202713Listeria monocytogenes 08-5578 chromosome, complete genome84.0594 %Subject ←→ Query21.9875
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genome79.7212 %Subject ←→ Query22.0057
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genome76.5472 %Subject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genome84.4792 %Subject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genome92.3101 %Subject ←→ Query22.2499
NC_012488:453431Listeria monocytogenes Clip81459, complete genome77.7604 %Subject ←→ Query22.4617
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome84.1054 %Subject ←→ Query22.6302
NC_017316:2466244*Enterococcus faecalis OG1RF chromosome, complete genome76.4461 %Subject ←→ Query22.7274
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genome80.674 %Subject ←→ Query23.3402
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genome81.3174 %Subject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genome84.2433 %Subject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genome84.8101 %Subject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genome77.3928 %Subject ←→ Query23.7547
NC_011660:2756860Listeria monocytogenes HCC23 chromosome, complete genome76.9455 %Subject ←→ Query24.8401
NC_015277:4269399Sphingobacterium sp. 21 chromosome, complete genome76.2194 %Subject ←→ Query26.7631
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genome78.4161 %Subject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genome75.7169 %Subject ←→ Query27.2413
NC_012488:732233Listeria monocytogenes Clip81459, complete genome82.2059 %Subject ←→ Query27.4501
NC_017316:2581781*Enterococcus faecalis OG1RF chromosome, complete genome76.492 %Subject ←→ Query27.6154
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genome86.1397 %Subject ←→ Query28.129
NC_013768:418000Listeria monocytogenes 08-5923, complete genome86.1826 %Subject ←→ Query28.129
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genome75.769 %Subject ←→ Query28.6557
NC_017138:980696*Bacillus megaterium WSH-002 chromosome, complete genome77.1599 %Subject ←→ Query28.7972
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genome76.4614 %Subject ←→ Query31.1734
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genome81.0447 %Subject ←→ Query31.4081
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genome76.2592 %Subject Query33.0055