Pre_GI: OUP Neighbours

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Query: NC_011660:2756860 Listeria monocytogenes HCC23 chromosome, complete genome

D: 24.8401

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.

Number of Neighbours: 57




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_017341:1482882Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,76.8689 %Subject ←→ Query18.0843
NC_017338:1419500Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete76.4798 %Subject ←→ Query19.6376
NC_013450:1446952Staphylococcus aureus subsp. aureus ED98, complete genome77.114 %Subject ←→ Query19.9805
NC_002973:1846000*Listeria monocytogenes str. 4b F2365, complete genome79.3107 %Subject ←→ Query20.0663
NC_017351:1464209*Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete76.7555 %Subject ←→ Query20.2004
NC_017337:1478448Staphylococcus aureus subsp. aureus ED133 chromosome, complete77.1814 %Subject ←→ Query20.2389
NC_017347:1483163Staphylococcus aureus subsp. aureus T0131 chromosome, complete76.8873 %Subject ←→ Query20.395
NC_016912:1374351Staphylococcus aureus subsp. aureus VC40 chromosome, complete77.0466 %Subject ←→ Query20.659
NC_009487:1557248Staphylococcus aureus subsp. aureus JH9 chromosome, complete76.875 %Subject ←→ Query20.6773
NC_018704:2149229*Amphibacillus xylanus NBRC 15112, complete genome75.3983 %Subject ←→ Query21.0816
NC_016941:1411500Staphylococcus aureus subsp. aureus MSHR1132, complete genome75.0705 %Subject ←→ Query21.0907
NC_016928:1440319Staphylococcus aureus subsp. aureus M013 chromosome, complete76.829 %Subject ←→ Query21.1409
NC_009632:1557122Staphylococcus aureus subsp. aureus JH1 chromosome, complete76.9577 %Subject ←→ Query21.1614
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genome81.829 %Subject ←→ Query21.6318
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genome80.2114 %Subject ←→ Query21.9417
NC_013766:1202713Listeria monocytogenes 08-5578 chromosome, complete genome78.0208 %Subject ←→ Query21.9875
NC_013766:906550Listeria monocytogenes 08-5578 chromosome, complete genome77.5123 %Subject ←→ Query22.0057
NC_017343:1391124Staphylococcus aureus subsp. aureus ECT-R 2, complete genome76.9393 %Subject ←→ Query22.0132
NC_011660:2924397Listeria monocytogenes HCC23 chromosome, complete genome77.8186 %Subject ←→ Query22.0817
NC_003210:721824Listeria monocytogenes EGD-e, complete genome82.3683 %Subject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genome77.0067 %Subject ←→ Query22.2499
NC_009641:1470500Staphylococcus aureus subsp. aureus str. Newman chromosome,76.875 %Subject ←→ Query22.2601
NC_012488:453431Listeria monocytogenes Clip81459, complete genome82.5306 %Subject ←→ Query22.4617
NC_011660:724711*Listeria monocytogenes HCC23 chromosome, complete genome76.9455 %Subject ←→ Query22.6167
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome83.367 %Subject ←→ Query22.6302
NC_017316:2466244*Enterococcus faecalis OG1RF chromosome, complete genome76.6146 %Subject ←→ Query22.7274
NC_013766:679906Listeria monocytogenes 08-5578 chromosome, complete genome79.3352 %Subject ←→ Query23.3402
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genome80.1624 %Subject ←→ Query23.6169
NC_012488:1159463Listeria monocytogenes Clip81459, complete genome77.8431 %Subject ←→ Query23.6635
NC_013768:721897Listeria monocytogenes 08-5923, complete genome81.6575 %Subject ←→ Query23.7536
NC_017316:2710021*Enterococcus faecalis OG1RF chromosome, complete genome77.2672 %Subject ←→ Query23.7547
NC_017316:2637707Enterococcus faecalis OG1RF chromosome, complete genome76.0509 %Subject ←→ Query24.8589
NC_017342:1848031Staphylococcus aureus subsp. aureus TCH60 chromosome, complete76.9976 %Subject ←→ Query26.3068
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genome76.777 %Subject ←→ Query26.5151
NC_015277:4269399Sphingobacterium sp. 21 chromosome, complete genome78.22 %Subject ←→ Query26.7631
NC_011660:366000Listeria monocytogenes HCC23 chromosome, complete genome80.5515 %Subject ←→ Query26.8414
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genome75.2543 %Subject ←→ Query27.2413
NC_012488:732233Listeria monocytogenes Clip81459, complete genome82.3131 %Subject ←→ Query27.4501
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genome80.1991 %Subject ←→ Query28.129
NC_013768:418000Listeria monocytogenes 08-5923, complete genome80.1991 %Subject ←→ Query28.129
NC_007793:1451409Staphylococcus aureus subsp. aureus USA300, complete genome76.9179 %Subject ←→ Query28.476
NC_009641:1979053Staphylococcus aureus subsp. aureus str. Newman chromosome,77.0649 %Subject ←→ Query28.638
NC_016052:1818659Tetragenococcus halophilus NBRC 12172, complete genome81.4645 %Subject ←→ Query28.6557
NC_002758:1508996Staphylococcus aureus subsp. aureus Mu50, complete genome76.8873 %Subject ←→ Query28.8616
NC_002951:1474465Staphylococcus aureus subsp. aureus COL, complete genome76.9271 %Subject ←→ Query29.1376
NC_017341:1976000Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,78.1219 %Subject ←→ Query29.1442
NC_002952:1497785Staphylococcus aureus subsp. aureus MRSA252, complete genome77.4847 %Subject ←→ Query29.2682
NC_002745:1432585Staphylococcus aureus subsp. aureus N315, complete genome76.8934 %Subject ←→ Query29.4273
NC_009782:1510396Staphylococcus aureus subsp. aureus Mu3, complete genome76.8964 %Subject ←→ Query29.4968
NC_008525:108687*Pediococcus pentosaceus ATCC 25745, complete genome77.1967 %Subject ←→ Query30.0765
NC_020995:1205524Enterococcus casseliflavus EC20, complete genome75.6771 %Subject ←→ Query31.1041
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genome76.2623 %Subject ←→ Query31.1734
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genome82.4265 %Subject ←→ Query31.4081
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genome75.4167 %Subject ←→ Query33.0055
NC_015460:1687684*Gallibacterium anatis UMN179 chromosome, complete genome77.2365 %Subject ←→ Query33.257
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genome75.9222 %Subject Query35.9035
NC_015277:2568781Sphingobacterium sp. 21 chromosome, complete genome75.0184 %Subject Query41.0445