Pre_GI Gene

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Host: NC_011991 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011991:65368 Agrobacterium vitis S4 plasmid pAtS4b, complete sequence

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
65368694384071Ti-type conjugative transfer relaxase TraAQuickGO ontologyBLASTP
6943569968534conjugative transfer signal peptidase TraFQuickGO ontologyBLASTP
69985711271143conjugal transfer protein Dtr systemQuickGO ontologyBLASTP
7156672201636conjugal transfer protein Dtr systemQuickGO ontology
7257473140567hypothetical protein
7351673695180hypothetical protein
7373474039306hypothetical protein
7445575141687hypothetical protein
75240763461107histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
76409776711263isopropylmalatehomocitratecitramalate synthaseQuickGO ontologyBLASTP
77770786368673-hydroxyisobutyrate dehydrogenaseQuickGO ontologyBLASTP
78790806371848ABC transporter nucleotide bindingATPase proteinQuickGO ontologyBLASTP
8069881372675hypothetical proteinBLASTP
8142282090669transcriptional regulatory proteinQuickGO ontologyBLASTP
8244482893450TransposaseQuickGO ontologyBLASTP
8290483491588IS21 family transposaseQuickGO ontologyBLASTP
8375784449693transposaseQuickGO ontologyBLASTP
8451684752237TransposaseQuickGO ontologyBLASTP
8480185253453hypothetical proteinBLASTP
8526985622354transposaseQuickGO ontologyBLASTP
85686873051620transposaseQuickGO ontologyBLASTP
8745387647195BLASTP
87689890861398glycosyltransferaseQuickGO ontologyBLASTP
89159910691911sulfate adenylate transferase subunit 1QuickGO ontologyBLASTP
9106991971903sulfate adenylate transferase subunit 2QuickGO ontologyBLASTP