Pre_GI: BLASTP Hits

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Query: NC_011991:65368:80698 Agrobacterium vitis S4 plasmid pAtS4b, complete sequence

Start: 80698, End: 81372, Length: 675

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015222:1203465:121817612181761218895720Nitrosomonas sp. AL212 chromosome, complete genomeChondroitin 4-O-sulfotransferase3e-1685.5
NC_011138:1005872:102163910216391022316678Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein4e-1478.2
NC_017326:1122103:112413811241381124878741Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequencehypothetical protein7e-1063.9
NC_017323:689512:713687713687714427741Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencehypothetical protein2e-0962.8
NC_003078:578000:601995601995602735741Sinorhizobium meliloti 1021 plasmid pSymB, complete sequencehypothetical protein3e-0962
NC_015596:1592500:159682815968281597568741Sinorhizobium meliloti AK83 chromosome 2, complete sequencehypothetical protein8e-0960.5
NC_018697:2055725:207077720707772071433657Cycloclasticus sp. P1 chromosome, complete genomehypothetical protein2e-0756.2