Pre_GI Gene

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Host: NC_009480 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009480:2580429 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25804292581325897putative transcriptional regulator LysR familyQuickGO ontologyBLASTP
25813632582022660putative metal ABC transporter permease componentQuickGO ontologyBLASTP
258202425830611038putative metal ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
25830582583990933putative metal ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
25843362585238903hypothetical protein
258525125870681818putative ABC transporter duplicated ATP-binding proteinQuickGO ontologyBLASTP
258713925888421704putative integraserecombinaseQuickGO ontologyBLASTP
258982925914481620hypothetical proteinBLASTP
25914412591923483hypothetical protein
259207125931861116hypothetical protein
25941842594678495putative endonucleaseQuickGO ontology
25952632596027765putative endonucleaseQuickGO ontologyBLASTP
259607325978571785hypothetical protein
25980672598270204hypothetical protein
25982672598668402hypothetical protein
25992592599699441hypothetical secreted protein putative pilinQuickGO ontology
26004592601316858hypothetical protein
26020142602694681putative resolvaseQuickGO ontologyBLASTP
26026912602870180hypothetical protein
26028542603441588hypothetical protein
26035702604280711hypothetical protein
26059232606174252hypothetical protein
26062352606807573hypothetical protein
26070982607688591hypothetical protein
26078022608245444hypothetical protein
26083972608900504BLASTP
260905126103551305putative multidrug-efflux MFS permeaseQuickGO ontologyBLASTP
26105192610689171hypothetical membrane proteinQuickGO ontology
261083626125691734hypothetical proteinBLASTP
26125662613045480hypothetical proteinBLASTP
26129522613452501hypothetical proteinBLASTP
26134492614183735putative glycosyl transferaseQuickGO ontologyBLASTP
26142422614418177BLASTP
26156242616055432molybdopterin cofactor biosynthesis proteinQuickGO ontologyBLASTP
26160522616606555putative molybdenum cofactor biosynthesis proteinQuickGO ontologyBLASTP
26166032617097495putative molybdenum cofactor biosynthesis proteinQuickGO ontologyBLASTP
261709026183821293putative molybdopterin biosynthesis proteinQuickGO ontologyBLASTP
26185152618739225hypothetical protein