Pre_GI: BLASTP Hits

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Query: NC_009480:2580429:2581363 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 2581363, End: 2582022, Length: 660

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003450:627500:648437648437649114678Corynebacterium glutamicum ATCC 13032, complete genomeABC-type transporter, permease component2e-40165
NC_006958:628035:649898649898650575678Corynebacterium glutamicum ATCC 13032, complete genomeABC transporter, transmembrane component2e-40165
NC_016786:533537:533537533537534214678Corynebacterium diphtheriae HC01 chromosome, complete genomeD-methionine transport system permease6e-40164
NC_016783:537717:537717537717538394678Corynebacterium diphtheriae INCA 402 chromosome, complete genomeD-methionine transport system permease protein8e-40163
NC_014168:56728:787757877579467693Segniliparus rotundus DSM 44985 chromosome, complete genomebinding-protein-dependent transporter inner membrane component2e-39162
NC_016779:312500:324028324028324693666Bacillus cereus F837/76 chromosome, complete genomemethionine ABC transporter permease8e-36150
NC_017200:345502:356168356168356833666Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ABC transporter permease5e-36150
NC_018704:2417902:243621924362192436881663Amphibacillus xylanus NBRC 15112, complete genomemethionine ABC transporter permease protein4e-36150
NC_011725:334000:335200335200335802603Bacillus cereus B4264 chromosome, complete genomeABC transporter permease1e-35149
NC_014171:343834:343834343834344499666Bacillus thuringiensis BMB171 chromosome, complete genomeABC transporter permease3e-35148
NC_012121:2218500:222297722229772223636660Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative ABC transporter permease protein7e-23107
NC_015660:3467579:349402434940243494674651Geobacillus thermoglucosidasius C56-YS93 chromosome, completeABC transporter integral membrane protein6e-22103
NC_014328:680085:694368694368695021654Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter permease2e-21102
NC_013169:1759900:175925017592501759903654Kytococcus sedentarius DSM 20547, complete genomeABC-type metal ion transport system, permease component2e-2099.4
NC_012779:610509:619788619788620387600Edwardsiella ictaluri 93-146, complete genomeD-methionine transport system permease protein MetI3e-1995.5
NC_015169:1:105210521711660Deinococcus proteolyticus MRP plasmid pDEIPR01, complete sequenceABC-type transporter, integral membrane subunit2e-1995.5
NC_020211:4168189:418199841819984182651654Serratia marcescens WW4, complete genomeD-methionine transport system permease9e-1993.6
NC_015566:4205854:422014942201494220802654Serratia sp. AS12 chromosome, complete genomeABC transporter integral membrane protein3e-1892
NC_012658:1617902:163198616319861632642657Clostridium botulinum Ba4 str. 657 chromosome, complete genomemethionine ABC transporter permease5e-1891.3
NC_011963:1482042:148487114848711485491621Rhodobacter sphaeroides KD131 chromosome 1, complete sequencebinding-protein-dependent transport system inner membrane protein5e-1891.3
NC_019978:2293327:231436623143662315037672Halobacteroides halobius DSM 5150, complete genomeABC-type metal ion transport system, permease component1e-1790.1
NC_004631:283289:284666284666285304639Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative ABC transporter permease protein1e-1789.7
NC_009832:4136878:415124041512404151893654Serratia proteamaculans 568, complete genomebinding-protein-dependent transport systems inner membrane component1e-1789.7
NC_010102:283364:287274287274287912639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1788.6
NC_009633:947695:967236967236967886651Alkaliphilus metalliredigens QYMF chromosome, complete genomebinding-protein-dependent transport system inner membrane protein4e-1787.8
NC_014837:2758239:275760227576022758258657Pantoea sp. At-9b chromosome, complete genomebinding-protein-dependent transporter inner membrane component6e-1787.4
NC_015958:1465631:147187814718781472531654Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeABC transporter integral membrane subunit7e-1787.4
NC_010321:1361748:136737713673771368030654Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completebinding-protein-dependent transport system inner membrane protein1e-1686.7
NC_010320:1769486:177396917739691774622654Thermoanaerobacter sp. X514 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein1e-1686.7
NC_014964:1353939:135956813595681360221654Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completebinding-protein-dependent transport systems inner membrane component1e-1686.7
NC_014538:1125000:113976011397601140413654Thermoanaerobacter sp. X513 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-1686.7
NC_014209:1363151:136980713698071370460654Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component1e-1686.3
NC_005090:1812833:184033618403361840986651Wolinella succinogenes DSM 1740, complete genomeABC TRANSPORTER PERMEASE COMPONENT2e-1685.9
NC_013921:1344000:134976213497621350415654Thermoanaerobacter italicus Ab9 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-1685.5
NC_015856:4342500:436588043658804366533654Collimonas fungivorans Ter331 chromosome, complete genomemethionine ABC transporter permease7e-1684
NC_015152:3100312:310611731061173106779663Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein1e-1583.6
NC_005085:2457295:248359724835972484283687Chromobacterium violaceum ATCC 12472, complete genomeprobable transmembrane ABC transporter protein1e-1583.2
NC_015437:2331082:234628123462812346934654Selenomonas sputigena ATCC 35185 chromosome, complete genomeABC-type transporter, integral membrane subunit2e-1582.8
NC_018664:2279687:228646322864632287131669Clostridium acidurici 9a chromosome, complete genomeD-methionine ABC transporter permease protein MetI3e-1582
NC_019908:748635:755374755374756054681Brachyspira pilosicoli P43/6/78 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein6e-1580.9
NC_014330:2457731:248467124846712485315645Brachyspira pilosicoli 95/1000 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-1580.9
NC_012917:1923059:194204819420481942707660Pectobacterium carotovorum subsp. carotovorum PC1, complete genomebinding-protein-dependent transport systems inner membrane component1e-1376.6
NC_013714:796442:808226808226808792567Bifidobacterium dentium Bd1, complete genomePermease protein of ABC transporter system1e-1273.2
NC_020063:2785652:280777028077702808435666Enterobacteriaceae bacterium strain FGI 57, complete genomeABC-type metal ion transport system, permease component2e-1272.4
NC_009077:874164:879519879519880136618Mycobacterium sp. JLS, complete genomebinding-protein-dependent transport systems inner membrane component7e-1270.9
NC_017100:2383487:238348723834872384161675Acetobacter pasteurianus IFO 3283-03, complete genomeD-methionine transporter permease protein5e-1270.9
NC_017125:2383467:238346723834672384141675Acetobacter pasteurianus IFO 3283-22, complete genomeD-methionine transporter permease protein5e-1270.9
NC_017146:2383509:238350923835092384183675Acetobacter pasteurianus IFO 3283-26, complete genomeD-methionine transporter permease protein5e-1270.9
NC_017150:2290681:229002622900262290700675Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-methionine transporter permease protein5e-1270.9
NC_015275:4577642:459101945910194591675657Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit9e-1270.5
NC_014817:1063173:108460410846041085275672Asticcacaulis excentricus CB 48 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component2e-1169.3
NC_015978:113656:128798128798129502705Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeD-methionine transport system permease metI9e-1167
NC_013714:796442:799570799570800229660Bifidobacterium dentium Bd1, complete genomePermease protein of ABC transporter system1e-1066.2
NC_016627:3158353:316756131675613168226666Clostridium clariflavum DSM 19732 chromosome, complete genomeABC-type metal ion transport system permease2e-1065.9
NC_012803:1117875:113474511347451135425681Micrococcus luteus NCTC 2665, complete genomeABC-type metal ion transport system, permease component2e-1065.9
NC_004668:3053119:307141930714193072090672Enterococcus faecalis V583, complete genomeABC transporter, permease protein5e-0961.2
NC_017316:2581781:260111526011152601786672Enterococcus faecalis OG1RF chromosome, complete genomemetal ion ABC superfamily ATP binding cassette transporter, membrane protein5e-0961.2
NC_010184:4763932:477915447791544779819666Bacillus weihenstephanensis KBAB4, complete genomebinding-protein-dependent transport systems inner membrane component8e-0857.4
NC_011969:4655602:467204946720494672714666Bacillus cereus Q1 chromosome, complete genomeABC transporter permease2e-0756.2
NC_011772:4875893:489090348909034891568666Bacillus cereus G9842, complete genomeABC transporter, permease protein2e-0756.2
NC_012814:1465738:146508214650821465741660Bifidobacterium animalis subsp. lactis Bl-04, complete genomeABC-type metal ion transport system, permease component4e-0755.1
NC_012815:1465670:146501414650141465673660Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeABC-type metal ion transport system, permease component4e-0755.1
NC_008601:1151653:1168330116833011698021473Francisella tularensis subsp. novicida U112, complete genomemethionine uptake transporter (MUT) family protein, membrane and periplasmic protein5e-0651.2