Pre_GI: BLASTP Hits

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Query: NC_009480:2580429:2602014 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 2602014, End: 2602694, Length: 681

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011662:2402408:242481724248172425392576Thauera sp. MZ1T, complete genomeResolvase domain protein4e-1168.6
NC_010512:866932:877112877112877666555Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceResolvase domain4e-1065.1
NC_010512:866932:878729878729879316588Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceResolvase domain4e-1064.7
NC_007086:3118116:313857331385733139139567Xanthomonas campestris pv. campestris str. 8004, complete genomeinvertase/recombinase protein9e-1063.9
NC_003902:1858349:190068919006891901255567Xanthomonas campestris pv. campestris str. ATCC 33913, completeinvertase/recombinase protein9e-1063.9
NC_002678:3210751:322303432230343223579546Mesorhizobium loti MAFF303099, complete genomeDNA invertase gene, RlgA1e-0963.5
NC_007507:101887:112277112277112843567Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Site-specific recombinase2e-0962.4
NC_008380:4968492:497249549724954973052558Rhizobium leguminosarum bv. viciae 3841, complete genomeputative DNA-invertase from lambdoid prophage E144e-0961.6
NC_009049:2131017:214715121471512147708558Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceResolvase, N-terminal domain5e-0961.2
NC_010511:915313:926278926278926835558Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein7e-0960.8
NC_014972:1923035:192995119299511930544594Desulfobulbus propionicus DSM 2032 chromosome, complete genomeResolvase domain-containing protein7e-0960.8
NC_016812:3641786:364349636434963644047552Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR6e-0960.8
NC_013037:2851940:285981428598142860419606Dyadobacter fermentans DSM 18053, complete genomeResolvase domain6e-0960.8
NC_007761:2071500:208028020802802080837558Rhizobium etli CFN 42, complete genomeprobable resolvase protein2e-0859.7
NC_013209:2782500:278940827894082789986579Acetobacter pasteurianus IFO 3283-01, complete genomeDNA resolvase1e-0859.7
NC_017100:2782303:278920027892002789778579Acetobacter pasteurianus IFO 3283-03, complete genomeDNA resolvase1e-0859.7
NC_017108:2779303:278653727865372787115579Acetobacter pasteurianus IFO 3283-12, complete genomeDNA resolvase1e-0859.7
NC_017111:2779321:278655527865552787133579Acetobacter pasteurianus IFO 3283-32, complete genomeDNA resolvase1e-0859.7
NC_017121:2781000:278795727879572788535579Acetobacter pasteurianus IFO 3283-07, complete genomeDNA resolvase1e-0859.7
NC_017125:2782283:278918027891802789758579Acetobacter pasteurianus IFO 3283-22, complete genomeDNA resolvase1e-0859.7
NC_017146:2782325:278922227892222789800579Acetobacter pasteurianus IFO 3283-26, complete genomeDNA resolvase1e-0859.7
NC_017150:2689920:269715426971542697732579Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase1e-0859.7
NC_011894:6888562:689656168965616897118558Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein2e-0859.3
NC_009052:2512373:251582725158272516417591Shewanella baltica OS155, complete genomeResolvase, N-terminal domain3e-0858.9
NC_011894:5468500:548154454815445482101558Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein3e-0858.5
NC_013198:1538792:155197115519711552531561Lactobacillus rhamnosus GG, complete genomeDNA invertase (plasmidic resolvase)3e-0858.5
NC_016809:112410:123075123075123632558Haemophilus influenzae 10810, complete genomeresolvase4e-0858.2
NC_011083:1524337:152522015252201525777558Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposon Tn3 resolvase4e-0858.2
NC_017150:853708:858568858568859134567Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase4e-0858.2
NC_015593:2553500:256540025654002565978579Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeResolvase domain-containing protein5e-0858.2
NC_010511:7024412:703913270391327039689558Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein5e-0858.2
NC_008752:2936933:296832429683242969247924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain6e-0857.8
NC_008752:3217695:323449732344973235420924Acidovorax avenae subsp. citrulli AAC00-1, complete genomeResolvase, N-terminal domain6e-0857.8
NC_009092:4585784:459390045939004594484585Shewanella loihica PV-4, complete genomeResolvase, N-terminal domain6e-0857.8
NC_016027:1776300:177822117782211778796576Gluconacetobacter xylinus NBRC 3288, complete genomeDNA resolvase6e-0857.8
NC_010511:7400255:741977274197727420377606Methylobacterium sp. 4-46 chromosome, complete genomeresolvase domain-containing protein5e-0857.8
NC_018678:1820390:183113018311301831720591Alteromonas macleodii str. 'English Channel 673' chromosome,resolvase8e-0857.4
NC_013730:5877879:588849758884975889102606Spirosoma linguale DSM 74, complete genomeResolvase domain protein8e-0857.4
NC_015376:2061990:206887020688702069424555Burkholderia gladioli BSR3 chromosome chromosome 2, completeResolvase domain protein8e-0857.4
NC_011586:268927:302004302004302561558Acinetobacter baumannii AB0057 chromosome, complete genometransposon Tn3 resolvase7e-0857.4
NC_011757:4293000:431121343112134311773561Methylobacterium chloromethanicum CM4, complete genomeResolvase domain1e-0757
NC_002939:1866651:187691018769101877482573Geobacter sulfurreducens PCA, complete genomeintegrative genetic element Gsu5, resolvase1e-0756.6
NC_006350:1938631:197529319752931975937645Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative recombinase2e-0756.2
NC_010622:2385932:239489423948942395490597Burkholderia phymatum STM815 chromosome 1, complete sequenceResolvase domain protein2e-0756.2
NC_009720:583060:605232605232605843612Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein2e-0756.2
NC_014034:3111981:312382431238243124375552Rhodobacter capsulatus SB1003 chromosome, complete genomeDNA-invertase3e-0755.5
NC_012559:1635922:165037916503791650963585Laribacter hongkongensis HLHK9, complete genomeTransposon Tn2501 resolvase3e-0755.5
NC_015594:214500:224207224207224749543Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeResolvase domain-containing protein3e-0755.5
NC_010830:692469:696181696181696741561Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0755.5
NC_009256:458649:476097476097476684588Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein3e-0755.5
NC_008740:257434:278266278266278829564Marinobacter aquaeolei VT8, complete genomeResolvase, N-terminal domain3e-0755.5
NC_010473:1384000:139323113932311393782552Escherichia coli str. K-12 substr. DH10B, complete genomeresolvase3e-0755.1
NC_015633:2801321:280895428089542809553600Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein4e-0755.1
NC_010125:2295500:230445923044592305064606Gluconacetobacter diazotrophicus PAl 5, complete genomeputative resolvase6e-0754.7
NC_011365:502620:511327511327511944618Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeResolvase domain6e-0754.7
NC_007507:101887:117717117717118640924Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,Tn5045 resolvase5e-0754.7
NC_006873:1:129129722594Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequenceputative resolvase/DNA invertase5e-0754.7
NC_008380:2287327:228814422881442288707564Rhizobium leguminosarum bv. viciae 3841, complete genomeputative DNA-invertase6e-0754.3
NC_015853:1:101731017310730558Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequencerecombinase6e-0754.3
NC_011666:2259447:227068822706882271299612Methylocella silvestris BL2, complete genomeResolvase domain protein9e-0753.9
NC_012804:1514533:152386215238621524686825Thermococcus gammatolerans EJ3, complete genomeResolvase, putative8e-0753.9
NC_010611:240839:255477255477255962486Acinetobacter baumannii ACICU, complete genomesite-specific recombinase, DNA invertase Pin protein8e-0753.9
NC_011586:268927:317739317739318224486Acinetobacter baumannii AB0057 chromosome, complete genomeinvertase/recombinase protein8e-0753.9
NC_012856:2266187:227986322798632280453591Ralstonia pickettii 12D chromosome 1, complete genomeResolvase domain protein1e-0653.5
NC_008345:4107847:413391541339154134481567Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein1e-0653.5
NC_003277:22257:367613676137321561Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative resolvase1e-0653.1
NC_014836:1606587:162288716228871623525639Desulfurispirillum indicum S5 chromosome, complete genomeResolvase domain-containing protein2e-0653.1
NC_014010:1392536:141697514169751417523549Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeResolvase, N-terminal domain protein2e-0652.8
NC_007650:2429307:244797324479732448641669Burkholderia thailandensis E264 chromosome II, complete sequenceTransposon Tn2501 resolvase2e-0652.8
NC_013730:4399643:441023544102354410807573Spirosoma linguale DSM 74, complete genome3e-0652.4
NC_008740:443274:465549465549466109561Marinobacter aquaeolei VT8, complete genomeResolvase, N-terminal domain3e-0652.4
NC_008786:1553833:156447815644781565035558Verminephrobacter eiseniae EF01-2, complete genomeResolvase, N-terminal domain2e-0652.4
NC_008347:1636660:164962816496281650176549Maricaulis maris MCS10, complete genomeResolvase3e-0652
NC_015733:4130000:414638341463834146976594Pseudomonas putida S16 chromosome, complete genometransposon resolvase3e-0652
NC_008541:472643:491091491091491672582Arthrobacter sp. FB24 chromosome 1, complete sequenceResolvase3e-0652
NC_009720:2489003:250632625063262506877552Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein3e-0652
NC_009656:115390:116395116395117324930Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein4e-0652
NC_015731:1578106:159112815911281591688561Nitrosomonas sp. Is79A3 chromosome, complete genomeResolvase domain-containing protein5e-0651.6
NC_015410:2258800:227344222734422274011570Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-0651.6
NC_015381:3607626:361913336191333619708576Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposon Tn2501 resolvase4e-0651.6
NC_018080:3055358:307262430726243073181558Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein4e-0651.6
NC_015730:1107840:112029511202951120915621Roseobacter litoralis Och 149 chromosome, complete genomebacteriophage DNA-invertase6e-0651.2
NC_017208:4435573:447154344715434472124582Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeSite-specific recombinase, resolvase family (DNA invertase-like protein)6e-0651.2
NC_008609:2787274:279950027995002800057558Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain8e-0650.8
NC_010995:1417329:143561314356131436203591Cellvibrio japonicus Ueda107, complete genomeinvertase/recombinase like protein8e-0650.8
NC_006351:520500:532668532668533243576Burkholderia pseudomallei K96243 chromosome 2, complete sequencetransposon Tn2501 resolvase7e-0650.8
NC_013791:875224:877866877866878429564Bacillus pseudofirmus OF4 chromosome, complete genomeresolvase7e-0650.8
NC_008268:3335035:334145233414523341988537Rhodococcus sp. RHA1, complete genomeresolvase7e-0650.8
NC_013446:4281250:429116142911614291727567Comamonas testosteroni CNB-2, complete genomeResolvase-like protein7e-0650.8
AC_000091:1191353:121126212112621211816555Escherichia coli W3110 DNA, complete genomesite-specific DNA recombinase6e-0650.8
NC_000913:1188999:120890812089081209462555Escherichia coli K12, complete genomee14 prophage; site-specific DNA recombinase6e-0650.8
NC_013850:2182337:224002122400212240590570Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein6e-0650.8
NC_009720:1248866:126996712699671270605639Xanthobacter autotrophicus Py2, complete genomeresolvase domain-containing protein6e-0650.8
NC_006350:1938631:197874719787471979340594Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative invertase8e-0650.4
NC_007946:289425:302117302117302680564Escherichia coli UTI89, complete genomeputative resolvase9e-0650.4