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Query: NC_009480:2580429 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 2580429, End: 2618739, Length: 38311

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019950:18708631870863189629425432Mycobacterium canettii CIPT 140060008 complete genome1e-27133BLASTN svgBLASTP svg
NC_000962:18708421870842189534224501Mycobacterium tuberculosis H37Rv, complete genome1e-27133BLASTN svgBLASTP svg
NC_002945:18562281856228188073824511Mycobacterium bovis AF2122/97, complete genome1e-27133BLASTN svgBLASTP svg
NC_008769:18761091876109190061624508Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome1e-27133BLASTN svgBLASTP svg
NC_009525:18723601872360189686024501Mycobacterium tuberculosis H37Ra, complete genome1e-27133BLASTN svgBLASTP svg
NC_009565:18662141866214189074224529Mycobacterium tuberculosis F11, complete genome1e-27133BLASTN svgBLASTP svg
NC_015848:18966601896660192209125432Mycobacterium canettii CIPT 140010059, complete genome1e-27133BLASTN svgBLASTP svg
NC_009664:1195630*1195630122637430745Kineococcus radiotolerans SRS30216, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_005125:35703853570385359009919715Gloeobacter violaceus PCC 7421, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_014168:56728*567288146324736Segniliparus rotundus DSM 44985 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_003911:1749467*1749467177014120675Silicibacter pomeroyi DSS-3, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008699:833737*83373785664022904Nocardioides sp. JS614, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009720:43675844367584439276525182Xanthobacter autotrophicus Py2, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014151:13739371373937139470220766Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_019902:27574275744716019587Thioalkalivibrio nitratireducens DSM 14787, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_014006:850763*85076390963758875Sphingobium japonicum UT26S chromosome 1, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_012803:11178751117875114878330909Micrococcus luteus NCTC 2665, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013521:94049594049596409923605Sanguibacter keddieii DSM 10542, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013967:19678961967896199023822343Haloferax volcanii DS2 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_003450:62750062750065461527116Corynebacterium glutamicum ATCC 13032, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_005125:63733363733366169324361Gloeobacter violaceus PCC 7421, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006958:62803562803565607628042Corynebacterium glutamicum ATCC 13032, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012724:30703863070386309007619691Burkholderia glumae BGR1 chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012791:2832001*2832001286519533195Variovorax paradoxus S110 chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_018750:26687832668783269022121439Streptomyces venezuelae ATCC 10712, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_011027:76022176022178470024480Chlorobaculum parvum NCIB 8327, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_008095:71390567139056716265723602Myxococcus xanthus DK 1622, complete genome5e-0661.9BLASTN svgBLASTP svg