Pre_GI Gene

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Host: NC_005363 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005363:1604337 Bdellovibrio bacteriovorus HD100, complete genome

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
160433716058001464hypothetical protein
160581516076441830phosphoglycerol transferaseQuickGO ontologyBLASTP
16077991608626828putative N-acetylglucosaminyltransferaseQuickGO ontologyBLASTP
160863616103091674putative cyclic beta-12-glucan modification proteinQuickGO ontologyBLASTP
161027216115311260putative O-antigen ligase WaaLQuickGO ontologyBLASTP
161163516133051671putative phosphoglycerol transferaseQuickGO ontologyBLASTP
16141081614893786hypothetical proteinBLASTP
16150531616036984probable UDP-glucose 4-epimeraseQuickGO ontologyBLASTP
161602916171771149putative aminotransferaseQuickGO ontologyBLASTP
161721516183871173putative UDP-N-acetylglucosamine-2-epimerase NeuCQuickGO ontologyBLASTP
16183841619271888putative formyltransferaseQuickGO ontologyBLASTP
161993616210061071putative N-acetylneuraminic acid synthetaseQuickGO ontologyBLASTP
16210121621671660hexapeptide transferase family proteinQuickGO ontologyBLASTP
162168016227321053Mannose-1-phosphate guanyltransferaseQuickGO ontologyBLASTP
16227101623402693probable acylneuraminate cytidylyltransferaseQuickGO ontologyBLASTP
16234801624298819hypothetical protein
162430316255711269putative polysaccharide biosynthesis protein CpsLQuickGO ontologyBLASTP
162554716267701224hypothetical protein
162680516279891185LPS biosynthesis protein WbpGQuickGO ontologyBLASTP
16279861628600615Imidazole glycerol phosphate synthase subunit hisHQuickGO ontologyBLASTP
16286021629381780imidazole glycerol phosphate synthase subunit HisFQuickGO ontologyBLASTP
162939416304371044capsular polysaccharide synthesis enzyme Cap8EQuickGO ontologyBLASTP
163044016315401101capsular polysaccharide synthesis enzyme Cap5FQuickGO ontologyBLASTP
163154216326691128capsular polysaccharide synthesis enzyme Cap5GQuickGO ontologyBLASTP
163266916338861218putative glycosyltransferaseQuickGO ontologyBLASTP
16338931634762870UDP-N-acetyl-D-quinovosamine 4-epimeraseQuickGO ontologyBLASTP
16347621635325564capsular polysaccharide synthesis enzyme Cap8MQuickGO ontologyBLASTP
16353761635957582putative acetyltransferaseQuickGO ontologyBLASTP
163608916379691881Nucleotide sugar epimerasedehydrataseQuickGO ontologyBLASTP
16380921638919828putative methyltransferaseQuickGO ontologyBLASTP
16389981639606609putative glycerophosphoryl diester phosphodiesteraseQuickGO ontologyBLASTP
16396311640074444hypothetical protein
164021416416921479putative 2-nitropropane dioxygenaseQuickGO ontologyBLASTP
16419861642456471transcriptional regulatorQuickGO ontologyBLASTP
16424531643040588cell filamentation proteinQuickGO ontologyBLASTP
16432931643613321hypothetical protein
16436151644037423putative DNA-binding proteinQuickGO ontologyBLASTP