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Query: NC_005363:1604337 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1604337, End: 1644099, Length: 39763

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:1887275*1887275191854531271Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1593.7BLASTN svgBLASTP svg
NC_014313:16549016549018947823989Hyphomicrobium denitrificans ATCC 51888 chromosome, complete2e-1489.7BLASTN svgBLASTP svg
NC_009138:11389171138917117310234186Herminiimonas arsenicoxydans, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012660:1804610*1804610183512430515Pseudomonas fluorescens SBW25 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013282:28277572827757286060332847Cronobacter turicensis, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011753:20617820617823311626939Vibrio splendidus LGP32 chromosome 1, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008740:29059902905990294863442645Marinobacter aquaeolei VT8, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015660:391627*39162741770326077Geobacillus thermoglucosidasius C56-YS93 chromosome, complete5e-0971.9BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014394:30367583036758307034433587Gallionella capsiferriformans ES-2 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010003:13604721360472142326562794Petrotoga mobilis SJ95, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011060:51487451487456528450411Pelodictyon phaeoclathratiforme BU-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015740:25873232587323260752820206Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0661.9BLASTN svgBLASTP svg
NC_009883:871594*87159489386122268Rickettsia bellii OSU 85-389, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_007940:782207*78220780170519499Rickettsia bellii RML369-C, complete genome5e-0661.9BLASTN svgBLASTP svg