Pre_GI: OUP Neighbours

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Query: NC_005363:1604337 Bdellovibrio bacteriovorus HD100, complete genome

D: 40.958

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.

Number of Neighbours: 161




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008571:365047Gramella forsetii KT0803, complete genome76.1121 %Subject Query19.622
NC_014774:671695Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete75.7261 %Subject Query20.4767
NC_015702:2902934Parachlamydia acanthamoebae UV7, complete genome76.492 %Subject Query21.0552
NC_014932:1387818*Bartonella clarridgeiae 73, complete genome79.038 %Subject Query21.3964
NC_014774:1057856*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete75.1869 %Subject Query21.4019
NC_009828:469778*Thermotoga lettingae TMO, complete genome76.2469 %Subject Query21.6939
NC_008783:29972*Bartonella bacilliformis KC583, complete genome76.0601 %Subject Query21.9601
NC_011527:1113217Coxiella burnetii CbuG_Q212, complete genome75.6618 %Subject Query22.3158
NC_014932:985882*Bartonella clarridgeiae 73, complete genome75.5055 %Subject Query22.4135
NC_005955:139907*Bartonella quintana str. Toulouse, complete genome76.8566 %Subject Query22.5833
NC_002942:2943206Legionella pneumophila subsp. pneumophila str. Philadelphia 1,75.9038 %Subject Query22.7983
NC_010117:980313Coxiella burnetii RSA 331, complete genome75.7292 %Subject Query22.8964
NC_005955:841781*Bartonella quintana str. Toulouse, complete genome79.0411 %Subject Query23.0636
NC_002971:780502Coxiella burnetii RSA 493, complete genome75.7047 %Subject Query23.0652
NC_011528:647401Coxiella burnetii CbuK_Q154, complete genome75.9712 %Subject Query23.1688
NC_005956:1888500*Bartonella henselae str. Houston-1, complete genome75.2267 %Subject Query23.3341
NC_005956:152497*Bartonella henselae str. Houston-1, complete genome76.9301 %Subject Query23.6077
NC_005956:1221352*Bartonella henselae str. Houston-1, complete genome76.9547 %Subject Query23.6912
NC_008783:671349*Bartonella bacilliformis KC583, complete genome75.2451 %Subject Query23.7232
NC_008783:119758*Bartonella bacilliformis KC583, complete genome77.6961 %Subject Query24.2765
NC_006368:3028286Legionella pneumophila str. Paris, complete genome77.0527 %Subject Query24.3495
NC_005955:1540838Bartonella quintana str. Toulouse, complete genome78.076 %Subject Query24.7325
NC_012846:825341*Bartonella grahamii as4aup, complete genome77.8523 %Subject Query24.9574
NC_012925:140000Streptococcus suis P1/7, complete genome79.28 %Subject Query25.152
NC_005955:1029435*Bartonella quintana str. Toulouse, complete genome76.6851 %Subject Query25.1664
NC_012985:1*Candidatus Liberibacter asiaticus str. psy62, complete genome75.2482 %Subject Query25.264
NC_005955:1205836*Bartonella quintana str. Toulouse, complete genome75.4013 %Subject Query25.4317
NC_012785:638000Kosmotoga olearia TBF 19.5.1, complete genome76.7126 %Subject Query25.4803
NC_013166:1841446*Kangiella koreensis DSM 16069, complete genome76.0417 %Subject Query25.6809
NC_007520:407627Thiomicrospira crunogena XCL-2, complete genome78.8113 %Subject Query25.8025
NC_005955:947500*Bartonella quintana str. Toulouse, complete genome76.7249 %Subject Query25.8177
NC_014774:1120383*Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete75.095 %Subject Query25.8217
NC_005956:699206*Bartonella henselae str. Houston-1, complete genome78.9553 %Subject Query25.8289
NC_013009:689978*Neorickettsia risticii str. Illinois, complete genome77.0649 %Subject Query26.5139
NC_015222:1203465*Nitrosomonas sp. AL212 chromosome, complete genome75.576 %Subject Query26.6263
NC_012846:1551000Bartonella grahamii as4aup, complete genome76.4859 %Subject Query26.6496
NC_009848:161373Bacillus pumilus SAFR-032, complete genome77.7665 %Subject Query26.7084
NC_015222:2475792*Nitrosomonas sp. AL212 chromosome, complete genome76.4338 %Subject Query26.7854
NC_015222:1127675*Nitrosomonas sp. AL212 chromosome, complete genome75.7353 %Subject Query26.9638
NC_015731:1731896Nitrosomonas sp. Is79A3 chromosome, complete genome76.4399 %Subject Query27.058
NC_012982:2730000Hirschia baltica ATCC 49814, complete genome79.9908 %Subject Query27.1485
NC_015222:523915Nitrosomonas sp. AL212 chromosome, complete genome77.0741 %Subject Query27.4514
NC_012846:2299282Bartonella grahamii as4aup, complete genome76.826 %Subject Query27.5544
NC_012846:1467446*Bartonella grahamii as4aup, complete genome76.8505 %Subject Query27.6969
NC_007520:903799*Thiomicrospira crunogena XCL-2, complete genome76.4982 %Subject Query27.7177
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome76.3756 %Subject Query27.7237
NC_012846:1837924*Bartonella grahamii as4aup, complete genome75.7721 %Subject Query27.7766
NC_010161:2381195Bartonella tribocorum CIP 105476, complete genome75.3248 %Subject Query27.8149
NC_014976:2867454Bacillus subtilis BSn5 chromosome, complete genome75.2482 %Subject Query27.8605
NC_012846:2154000*Bartonella grahamii as4aup, complete genome76.1887 %Subject Query27.9365
NC_016023:875416Bacillus coagulans 36D1 chromosome, complete genome75.2328 %Subject Query28.0678
NC_015222:2089767*Nitrosomonas sp. AL212 chromosome, complete genome76.8413 %Subject Query28.1185
NC_008783:222000*Bartonella bacilliformis KC583, complete genome75.962 %Subject Query28.2988
NC_009009:1792317*Streptococcus sanguinis SK36, complete genome75.4749 %Subject Query28.3209
NC_015160:1697125*Odoribacter splanchnicus DSM 20712 chromosome, complete genome75.4259 %Subject Query28.5749
NC_013009:608515*Neorickettsia risticii str. Illinois, complete genome75.5208 %Subject Query28.6073
NC_012982:1597697Hirschia baltica ATCC 49814, complete genome76.4767 %Subject Query28.6965
NC_015160:1117371Odoribacter splanchnicus DSM 20712 chromosome, complete genome77.6838 %Subject Query28.7816
NC_015160:3585354Odoribacter splanchnicus DSM 20712 chromosome, complete genome75.0276 %Subject Query28.8546
NC_015222:2683056Nitrosomonas sp. AL212 chromosome, complete genome75.7751 %Subject Query28.941
NC_015660:3467579*Geobacillus thermoglucosidasius C56-YS93 chromosome, complete75.046 %Subject Query28.9622
NC_005955:173436*Bartonella quintana str. Toulouse, complete genome76.0141 %Subject Query28.9987
NC_012982:2772976Hirschia baltica ATCC 49814, complete genome78.0116 %Subject Query29.0125
NC_010161:1914000*Bartonella tribocorum CIP 105476, complete genome77.0159 %Subject Query29.0734
NC_015222:1607757Nitrosomonas sp. AL212 chromosome, complete genome76.7862 %Subject Query29.1095
NC_015731:990000*Nitrosomonas sp. Is79A3 chromosome, complete genome75.6801 %Subject Query29.1132
NC_015222:2136657*Nitrosomonas sp. AL212 chromosome, complete genome77.7635 %Subject Query29.1491
NC_014932:1232346*Bartonella clarridgeiae 73, complete genome76.2347 %Subject Query29.2886
NC_014334:37040Lactobacillus casei str. Zhang chromosome, complete genome75.0429 %Subject Query29.347
NC_009654:2940278Marinomonas sp. MWYL1, complete genome76.7708 %Subject Query29.6145
NC_013199:392450*Lactobacillus rhamnosus Lc 705, complete genome76.4093 %Subject Query29.6644
NC_012881:334250Desulfovibrio salexigens DSM 2638, complete genome78.3578 %Subject Query29.9003
NC_009654:4253431*Marinomonas sp. MWYL1, complete genome76.5931 %Subject Query29.9246
NC_009654:1123709*Marinomonas sp. MWYL1, complete genome77.1017 %Subject Query29.9895
NC_012881:964823*Desulfovibrio salexigens DSM 2638, complete genome76.9547 %Subject Query30.0188
NC_009654:3215205*Marinomonas sp. MWYL1, complete genome77.6899 %Subject Query30.1455
NC_000964:649781Bacillus subtilis subsp. subtilis str. 168, complete genome75.5423 %Subject Query30.1775
NC_015276:1947936*Marinomonas mediterranea MMB-1 chromosome, complete genome75.5821 %Subject Query30.3016
NC_009654:3849774*Marinomonas sp. MWYL1, complete genome79.0288 %Subject Query30.3052
NC_009654:2309365*Marinomonas sp. MWYL1, complete genome78.8174 %Subject Query30.338
NC_009654:1729159*Marinomonas sp. MWYL1, complete genome75.527 %Subject Query30.3593
NC_012982:1899973Hirschia baltica ATCC 49814, complete genome77.981 %Subject Query30.3976
NC_012982:1569426Hirschia baltica ATCC 49814, complete genome81.1918 %Subject Query30.411
NC_011830:720756Desulfitobacterium hafniense DCB-2, complete genome78.0055 %Subject Query30.4292
NC_008322:373531Shewanella sp. MR-7, complete genome75.9406 %Subject Query30.486
NC_007954:1324062*Shewanella denitrificans OS217, complete genome75.5576 %Subject Query30.7014
NC_012881:1802000*Desulfovibrio salexigens DSM 2638, complete genome82.1967 %Subject Query30.7507
NC_015276:632206Marinomonas mediterranea MMB-1 chromosome, complete genome75.6097 %Subject Query30.8175
NC_012846:1888000*Bartonella grahamii as4aup, complete genome75.6801 %Subject Query30.8764
NC_007907:1996194Desulfitobacterium hafniense Y51, complete genome76.0968 %Subject ←→ Query31.019
NC_013198:394000*Lactobacillus rhamnosus GG, complete genome75.9651 %Subject ←→ Query31.056
NC_007907:4859735Desulfitobacterium hafniense Y51, complete genome77.0098 %Subject ←→ Query31.2044
NC_015276:2769000Marinomonas mediterranea MMB-1 chromosome, complete genome79.421 %Subject ←→ Query31.3112
NC_012881:2310141*Desulfovibrio salexigens DSM 2638, complete genome78.2476 %Subject ←→ Query31.4164
NC_016023:1959255Bacillus coagulans 36D1 chromosome, complete genome75.5453 %Subject ←→ Query31.4721
NC_009654:2958316*Marinomonas sp. MWYL1, complete genome78.7224 %Subject ←→ Query31.4845
NC_008607:144000Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence76.152 %Subject ←→ Query31.5274
NC_011830:3081726*Desulfitobacterium hafniense DCB-2, complete genome75.527 %Subject ←→ Query31.7425
NC_011830:4399642Desulfitobacterium hafniense DCB-2, complete genome76.1489 %Subject ←→ Query31.7789
NC_008344:2434344*Nitrosomonas eutropha C91, complete genome76.9056 %Subject ←→ Query31.7911
NC_013132:7954000*Chitinophaga pinensis DSM 2588, complete genome75.7904 %Subject ←→ Query31.7994
NC_014011:472650Aminobacterium colombiense DSM 12261 chromosome, complete genome75.7537 %Subject ←→ Query31.8402
NC_011026:3009500*Chloroherpeton thalassium ATCC 35110, complete genome78.6979 %Subject ←→ Query31.8736
NC_011026:2533017*Chloroherpeton thalassium ATCC 35110, complete genome77.549 %Subject ←→ Query31.9226
NC_010161:1501758*Bartonella tribocorum CIP 105476, complete genome75.9283 %Subject ←→ Query31.9674
NC_007907:761486Desulfitobacterium hafniense Y51, complete genome75.0643 %Subject ←→ Query32.0392
NC_012108:2220983*Desulfobacterium autotrophicum HRM2, complete genome77.212 %Subject ←→ Query32.3332
NC_007907:4714844Desulfitobacterium hafniense Y51, complete genome76.1795 %Subject ←→ Query32.3756
NC_011026:2450325Chloroherpeton thalassium ATCC 35110, complete genome76.6207 %Subject ←→ Query32.4678
NC_006322:2658587Bacillus licheniformis ATCC 14580, complete genome76.348 %Subject ←→ Query32.5167
NC_012881:4023895Desulfovibrio salexigens DSM 2638, complete genome79.4026 %Subject ←→ Query32.5868
NC_015172:1621223Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.3248 %Subject ←→ Query32.773
NC_007907:4926548Desulfitobacterium hafniense Y51, complete genome77.8983 %Subject ←→ Query32.7918
NC_013895:605488*Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete75.4075 %Subject ←→ Query32.8408
NC_013166:1149760*Kangiella koreensis DSM 16069, complete genome76.4553 %Subject ←→ Query33.1195
NC_005126:2063667Photorhabdus luminescens subsp. laumondii TTO1, complete genome75.6648 %Subject ←→ Query33.1955
NC_014976:2420000Bacillus subtilis BSn5 chromosome, complete genome75.4565 %Subject ←→ Query33.5606
NC_014551:2510000*Bacillus amyloliquefaciens DSM 7, complete genome78.8879 %Subject ←→ Query33.5634
NC_011060:1538375Pelodictyon phaeoclathratiforme BU-1, complete genome78.9216 %Subject ←→ Query33.6941
NC_013199:2058857*Lactobacillus rhamnosus Lc 705, complete genome76.057 %Subject ←→ Query33.7873
NC_013421:1819036Pectobacterium wasabiae WPP163, complete genome75.6648 %Subject ←→ Query34.0279
NC_008344:1899317*Nitrosomonas eutropha C91, complete genome78.3609 %Subject ←→ Query34.0964
NC_011830:1037520Desulfitobacterium hafniense DCB-2, complete genome76.9792 %Subject ←→ Query34.1988
NC_005955:1166521*Bartonella quintana str. Toulouse, complete genome75.3339 %Subject ←→ Query34.2164
NC_015731:2950874*Nitrosomonas sp. Is79A3 chromosome, complete genome75.337 %Subject ←→ Query34.276
NC_012881:3004784Desulfovibrio salexigens DSM 2638, complete genome82.2733 %Subject ←→ Query34.3173
NC_016023:2163000*Bacillus coagulans 36D1 chromosome, complete genome75.7476 %Subject ←→ Query34.5001
NC_007907:5185510Desulfitobacterium hafniense Y51, complete genome75.3064 %Subject ←→ Query34.7666
NC_013198:2088780*Lactobacillus rhamnosus GG, complete genome75.9804 %Subject ←→ Query35.0489
NC_014933:270000*Bacteroides helcogenes P 36-108 chromosome, complete genome77.5551 %Subject ←→ Query35.214
NC_011060:514874Pelodictyon phaeoclathratiforme BU-1, complete genome80.8364 %Subject ←→ Query35.4838
NC_011830:4722607Desulfitobacterium hafniense DCB-2, complete genome76.4982 %Subject ←→ Query35.7585
NC_015634:2595500Bacillus coagulans 2-6 chromosome, complete genome78.2843 %Subject ←→ Query35.9909
NC_012997:2405500*Teredinibacter turnerae T7901, complete genome76.9914 %Subject ←→ Query36.1474
NC_007907:4956500Desulfitobacterium hafniense Y51, complete genome76.3051 %Subject ←→ Query36.3707
NC_006322:1119471Bacillus licheniformis ATCC 14580, complete genome75.3125 %Subject ←→ Query36.4447
NC_011830:1288984Desulfitobacterium hafniense DCB-2, complete genome75.2543 %Subject ←→ Query36.5143
NC_006322:203932*Bacillus licheniformis ATCC 14580, complete genome75.9988 %Subject ←→ Query37.4168
NC_012997:4545875Teredinibacter turnerae T7901, complete genome78.799 %Subject ←→ Query37.5301
NC_007907:3722500Desulfitobacterium hafniense Y51, complete genome75.5607 %Subject ←→ Query38.1854
NC_008639:2968000*Chlorobium phaeobacteroides DSM 266, complete genome79.8192 %Subject ←→ Query38.2214
NC_002488:1099975*Xylella fastidiosa 9a5c, complete genome76.345 %Subject ←→ Query38.4451
NC_015572:1252000Methylomonas methanica MC09 chromosome, complete genome79.6048 %Subject ←→ Query38.7541
NC_010831:2078329*Chlorobium phaeobacteroides BS1, complete genome79.4332 %Subject ←→ Query39.1588
NC_007912:231817Saccharophagus degradans 2-40, complete genome77.7849 %Subject ←→ Query39.234
NC_012691:1743038Tolumonas auensis DSM 9187, complete genome75.2328 %Subject ←→ Query39.3562
NC_011060:1898224Pelodictyon phaeoclathratiforme BU-1, complete genome77.6654 %Subject ←→ Query39.6782
NC_004757:2213806*Nitrosomonas europaea ATCC 19718, complete genome77.2978 %Subject ←→ Query39.9231
NC_014033:103020Prevotella ruminicola 23 chromosome, complete genome76.1397 %Subject ←→ Query42.2197
NC_011059:1896593Prosthecochloris aestuarii DSM 271, complete genome75.8027 %Subject ←→ Query42.2964
NC_015977:2874000*Roseburia hominis A2-183 chromosome, complete genome75.9314 %Subject ←→ Query42.5037
NC_011060:2099255Pelodictyon phaeoclathratiforme BU-1, complete genome75.4779 %Subject ←→ Query43.0974
NC_004556:531000*Xylella fastidiosa Temecula1, complete genome75.6863 %Subject ←→ Query43.2204
NC_010577:530917*Xylella fastidiosa M23, complete genome75.6219 %Subject ←→ Query44.2251
NC_007645:2408125*Hahella chejuensis KCTC 2396, complete genome78.1955 %Subject ←→ Query44.4654
NC_007645:2779381*Hahella chejuensis KCTC 2396, complete genome78.9124 %Subject ←→ Query45.1313
NC_007947:2140000*Methylobacillus flagellatus KT, complete genome76.0233 %Subject ←→ Query45.7739
NC_009832:1719149Serratia proteamaculans 568, complete genome75.095 %Subject ←→ Query48.0067
NC_008700:2701500*Shewanella amazonensis SB2B, complete genome76.2377 %Subject ←→ Query49.9286
NC_013173:1356526*Desulfomicrobium baculatum DSM 4028, complete genome81.2561 %Subject ←→ Query49.9427
NC_009092:1599526Shewanella loihica PV-4, complete genome76.5319 %Subject ←→ Query50.5468