Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1642453 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1642453, End: 1643040, Length: 588

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010995:1417329:142267514226751423277603Cellvibrio japonicus Ueda107, complete genomeFic family protein1e-34145
NC_002939:1505701:151995715199571520541585Geobacter sulfurreducens PCA, complete genomeFic family protein4e-33140
NC_016593:762216:800736800736801482747Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeFilamentation induced by cAMP protein Fic2e-0962.4
NC_008726:3858209:387762838776283878266639Mycobacterium vanbaalenii PYR-1, complete genomefilamentation induced by cAMP protein Fic9e-0856.6
NC_009719:336000:337401337401337976576Parvibaculum lavamentivorans DS-1 chromosome, complete genomefilamentation induced by cAMP protein fic3e-0755.1
NC_014844:511552:523531523531524118588Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefilamentation induced by cAMP protein Fic5e-0754.3
NC_003552:2634828:263789226378922638872981Methanosarcina acetivorans C2A, complete genomehypothetical protein7e-0753.9