Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1640214 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1640214, End: 1641692, Length: 1479

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009380:1827328:1842872184287218443351464Salinispora tropica CNB-440 chromosome, complete genome2-nitropropane dioxygenase1e-128460
NC_009953:1831000:1842326184232618437831458Salinispora arenicola CNS-205 chromosome, complete genome2-nitropropane dioxygenase1e-123444
NC_014844:2056943:2056943205694320580431101Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2-nitropropane dioxygenase NPD3e-0963.9
NC_011026:2533017:2574167257416725754471281Chloroherpeton thalassium ATCC 35110, complete genome2-nitropropane dioxygenase NPD7e-0858.9
NC_016584:4860360:489315648931564894109954Desulfosporosinus orientis DSM 765 chromosome, complete genome2-nitropropane dioxygenase3e-0653.9
NC_015501:1669521:168331216833121684268957Porphyromonas asaccharolytica DSM 20707 chromosome, complete2-nitropropane dioxygenase NPD9e-0652