Pre_GI: BLASTP Hits

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Query: NC_016830:1182765:1191245 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1191245, End: 1191841, Length: 597

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:5724000:574193757419375742581645Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator4e-34144
NC_015723:384000:389388389388389915528Cupriavidus necator N-1 chromosome 2, complete sequenceTetR family transcriptional regulator7e-0960.5
NC_012969:1442147:145618814561881456784597Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeTetR family transcriptional regulator1e-0859.3
NC_013592:3212834:322058632205863221164579Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family3e-0858.5
NC_014539:743523:770361770361770942582Burkholderia sp. CCGE1003 chromosome 1, complete sequenceregulatory protein TetR2e-0755.8
NC_007005:830467:845008845008845643636Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, TetR2e-0755.5
NC_012968:1191037:120521612052161205824609Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family3e-0755.1
NC_013929:4807910:481708548170854817657573Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_013929:8474195:850754385075438508133591Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator4e-0754.7
NC_016582:1639375:167531116753111675883573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative TetR family regulator5e-0754.3
NC_004129:4993974:499953349995335000093561Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, TetR family2e-0652.4
NC_014837:3739408:374879137487913749378588Pantoea sp. At-9b chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_013592:1602242:160886316088631609432570Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family2e-0652.4
NC_014306:642152:655932655932656531600Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family2e-0652.4
NC_009656:1994392:203873320387332039275543Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transcriptional regulator3e-0651.6
NC_018868:2935580:295135029513502951889540Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometranscriptional regulator6e-0650.8
NC_012660:1804610:183376918337691834347579Pseudomonas fluorescens SBW25 chromosome, complete genomeputative TetR family regulatory protein6e-0650.8