Pre_GI: BLASTN Hits

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Query: NC_015947:1290614 Burkholderia sp. JV3 chromosome, complete genome

Start: 1290614, End: 1315099, Length: 24486

Host Lineage: Stenotrophomonas maltophilia; Stenotrophomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Environment: Rhizosphere, Host, Rhizosphere-colonizing; Temp: Mesophile. This species is an uncommon but serious source of infection in patients with breathing tubes such as endotracheal or tracheostomy tubes, or with chronically indwelling urinary catheters. Although the organism can colonize the devices without causing an infection, under certain conditions it can cause pneumonia, urinary tract infections, or an infection of the blood. This organism can also cause infection in immunocompromised patients. It has resistance to many commonly used antibiotics and therefore is often difficult to eradicate. Most strains are resistant to co-trimoxazole.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010943:14268851426885145859931715Stenotrophomonas maltophilia K279a, complete genome017970BLASTN svgBLASTP svg
NC_010717:47877504787750482298935240Xanthomonas oryzae pv. oryzae PXO99A, complete genome2e-143517BLASTN svgBLASTP svg
NC_013722:15778181577818160047922662Xanthomonas albilineans, complete genome1e-79305BLASTN svgBLASTP svg
NC_007508:4476726*4476726449836521640Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-74287BLASTN svgBLASTP svg
NC_012721:10950010950012980920310Burkholderia glumae BGR1 chromosome 2, complete genome3e-37165BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-35159BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome1e-33153BLASTN svgBLASTP svg
NC_012721:24000024000026711727118Burkholderia glumae BGR1 chromosome 2, complete genome1e-30143BLASTN svgBLASTP svg
NC_016010:1822212*1822212190411881907Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete6e-29137BLASTN svgBLASTP svg
NC_008825:27006172700617271935418738Methylibium petroleiphilum PM1, complete genome9e-28133BLASTN svgBLASTP svg
NC_003902:35140003514000353798123982Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-26129BLASTN svgBLASTP svg
NC_003296:13413531341353136699725645Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-26129BLASTN svgBLASTP svg
NC_012724:26110002611000263159920600Burkholderia glumae BGR1 chromosome 1, complete genome9e-25123BLASTN svgBLASTP svg
NC_014973:10715001071500110044928950Geobacter sp. M18 chromosome, complete genome9e-25123BLASTN svgBLASTP svg
NC_003296:16969581696958171877421817Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-24121BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome4e-24121BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_015138:20132320132322011418792Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete6e-23117BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome2e-22115BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome9e-22113BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome3e-21111BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-20109BLASTN svgBLASTP svg
NC_014323:27327273274647019144Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_010002:37853133785313380809922787Delftia acidovorans SPH-1, complete genome2e-19105BLASTN svgBLASTP svg
NC_014216:608740*60874062946620727Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015563:4093650*4093650411960125952Delftia sp. Cs1-4 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015563:3786192*3786192382040734216Delftia sp. Cs1-4 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015138:42467874246787426900822222Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1695.6BLASTN svgBLASTP svg
NC_012721:24068742406874243009923226Burkholderia glumae BGR1 chromosome 2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007511:13009781300978132645425477Burkholderia sp. 383 chromosome 2, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_002927:12925731292573131262720055Bordetella bronchiseptica RB50, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete8e-1693.7BLASTN svgBLASTP svg
NC_008391:63999663999666160321608Burkholderia cepacia AMMD chromosome 2, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_010002:33997703399770341841218643Delftia acidovorans SPH-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010682:112474724747Ralstonia pickettii 12J chromosome 1, complete sequence3e-1591.7BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013956:17621711762171180720245032Pantoea ananatis LMG 20103 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete1e-1489.7BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_006351:16317601631760165459922840Burkholderia pseudomallei K96243 chromosome 2, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_007435:30593730593732993724001Burkholderia pseudomallei 1710b chromosome II, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_009078:15785001578500160125422755Burkholderia pseudomallei 1106a chromosome II, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_014500:30717643071764309400622243Dickeya dadantii 3937 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012880:4117376*4117376413569218317Dickeya dadantii Ech703, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012779:36527373652737367609923363Edwardsiella ictaluri 93-146, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010002:39808323980832399913918308Delftia acidovorans SPH-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013282:37811493781149380484323695Cronobacter turicensis, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014118:987889987889104450356615Burkholderia sp. CCGE1002 chromosome chromosome 2, complete8e-1383.8BLASTN svgBLASTP svg
NC_014121:45773244577324460113023807Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete8e-1383.8BLASTN svgBLASTP svg
NC_003902:39600039600042428128282Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-1281.8BLASTN svgBLASTP svg
NC_007086:39672339672342172325001Xanthomonas campestris pv. campestris str. 8004, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007952:44461644461646378519170Burkholderia xenovorans LB400 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_012912:777592*77759280009922508Dickeya zeae Ech1591, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-1281.8BLASTN svgBLASTP svg
NC_013592:1056500*1056500108285526356Dickeya dadantii Ech586, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009138:46726846726851435347086Herminiimonas arsenicoxydans, complete genome1e-1179.8BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008392:66600066600068894522946Burkholderia cepacia AMMD chromosome 3, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015061:3840463*3840463391463974177Rahnella sp. Y9602 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015563:35716823571682359959927918Delftia sp. Cs1-4 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014733:2201485*2201485222586124377Methylovorus sp. MP688 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010688:38700038700041036023361Xanthomonas campestris pv. campestris, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009074:3791232*3791232381784126610Burkholderia pseudomallei 668 chromosome I, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete8e-1073.8BLASTN svgBLASTP svg
NC_012912:40718594071859411755145693Dickeya zeae Ech1591, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012723:71637716379733525699Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_012880:24800002480000249810318104Dickeya dadantii Ech703, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013446:1889500*1889500191816228663Comamonas testosteroni CNB-2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014931:4210029*4210029424439734369Variovorax paradoxus EPS chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003197:17132591713259173659923341Salmonella typhimurium LT2, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003295:92125692125694709925844Ralstonia solanacearum GMI1000, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete5e-0867.9BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014500:31752833175283321401838736Dickeya dadantii 3937 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_012724:24435002443500246405820559Burkholderia glumae BGR1 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010424:69718769718777730380117Candidatus Desulforudis audaxviator MP104C, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010681:22141622141624493823523Burkholderia phytofirmans PsJN chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_012803:2195808*2195808224976153954Micrococcus luteus NCTC 2665, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015953:26035262603526262609922574Streptomyces sp. SirexAA-E chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:7563668*7563668760232338656Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008700:1115436*1115436114339927964Shewanella amazonensis SB2B, complete genome3e-0661.9BLASTN svgBLASTP svg