Pre_GI: BLASTP Hits

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Query: NC_015259:3902136:3902136 Polymorphum gilvum SL003B-26A1 chromosome, complete genome

Start: 3902136, End: 3904241, Length: 2106

Host Lineage: Polymorphum gilvum; Polymorphum; ; ; Proteobacteria; Bacteria

General Information: Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA1e-42175
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA6e-42172
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA2e-40167
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-39165
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein4e-38160
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein4e-38160
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein5e-38160
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-37157
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA6e-37156
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA6e-37156
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-36154
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-36154
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-36154
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein6e-36153
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA5e-36153
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA4e-36153
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA6e-36152
NC_013716:2139952:2152084215208421535981515Citrobacter rodentium ICC168, complete genomeputative MobA/MobL family mobilization protein2e-35151
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA3e-34147
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa2e-34147
NC_016832:948029:9618499618499633601512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MobA/MobL9e-34145
NC_007802:3252300:3275866327586632772091344Jannaschia sp. CCS1, complete genomeMobA/MobL protein4e-33143
NC_004547:1873390:1909271190927119107311461Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable plasmid-related protein4e-33143
NC_012891:1277966:1292370129237012938541485Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein6e-33142
NC_011274:2044000:2061616206161620631361521Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Conjugal transfer protein2e-32141
NC_016831:947281:9714039714039729231521Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Conjugal transfer protein2e-32141
NC_011205:2180598:2197505219750521990251521Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853MobA/MobL family protein2e-32141
NC_011294:2053991:2070488207048820720081521Salmonella enterica subsp. enterica serovar Enteritidis strconjugal transfer protein2e-32141
NC_011745:2209288:2252468225246822539491482Escherichia coli ED1a chromosome, complete genomeputative mobilization protein1e-32141
NC_011149:1987291:2004722200472220062271506Salmonella enterica subsp. enterica serovar Agona str. SL483,MobA/MobL family6e-32139
NC_016026:1224129:1241326124132612434102085Micavibrio aeruginosavorus ARL-13 chromosome, complete genomemobA/MobL family protein1e-31139
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA2e-31138
NC_004431:2185750:2201204220120422027061503Escherichia coli CFT073, complete genomehypothetical protein1e-31138
NC_008253:1938975:1954359195435919558611503Escherichia coli 536, complete genomehypothetical protein1e-31138
NC_013316:2033906:2054064205406420555151452Clostridium difficile R20291, complete genome2e-31137
NC_014828:541874:5560295560295574741446Ethanoligenens harbinense YUAN-3 chromosome, complete genome3e-29130
NC_017202:56000:7778377783798792097Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Nickase TraA2e-28128
NC_010125:2295500:2301968230196823033711404Gluconacetobacter diazotrophicus PAl 5, complete genomeputative mobilization protein A1e-27125
NC_011365:502620:5087915087915101941404Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeMobA/MobL protein1e-27125
NC_015603:1:17117122312061Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequencenickase5e-27123
NC_007508:1221500:1228615122861512306662052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative MobA/MobL family protein1e-26121
NC_004547:3207776:3243722324372232451251404Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid mobilization protein3e-26120
NC_016010:1822212:1878854187885418804971644Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeplasmid mobilization protein2e-24114
NC_003919:3812778:3840055384005538416471593Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein3e-24114
NC_012781:700226:7232517232517248311581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein3e-24114
NC_012781:2552723:2573928257392825755081581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein3e-24114
NC_009656:5505413:5514427551442755156501224Pseudomonas aeruginosa PA7 chromosome, complete genomemobilization protein7e-24112
NC_015224:3587500:360425036042503604741492Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative Conjugal transfer protein3e-23110
NC_010688:1192410:1230572123057212321581587Xanthomonas campestris pv. campestris, complete genomeputative conjugal transfer protein6e-23109
NC_017271:3641705:3666804366680436684141611Xanthomonas campestris pv. raphani 756C chromosome, completeMobA-MobL family protein7e-23109
NC_010688:3515885:3538586353858635401781593Xanthomonas campestris pv. campestris, complete genomeMobA/MobL family protein8e-23109
NC_007086:2887875:2907735290773529093781644Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein1e-22108
NC_010688:3030873:3040681304068130422761596Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein1e-22108
NC_007508:1221500:1252752125275212543531602Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMobA/MobL family protein2e-22108
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA2e-21105
NC_010510:339879:3631673631673647441578Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete2e-20101
NC_014727:1485656:149873614987361499374639Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,nickase, traa like protein4e-20100
NC_009092:1127000:1144881114488111461731293Shewanella loihica PV-4, complete genomeMobA/MobL protein1e-1998.6
NC_013855:964000:9651729651729682163045Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein9e-1995.9
NC_010688:3229820:3243901324390132455261626Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein7e-1789.7
NC_003919:1716831:1739162173916217407601599Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein6e-1686.7
NC_007086:2887875:292775329277532928598846Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein1e-1585.5
NC_015977:3424178:3466782346678234680711290Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-1585.1
NC_017028:1030000:1046311104631110504474137Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA2e-1481.3
NC_017028:1030000:103036510303651031309945Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA3e-1480.9
NC_017044:702483:7137857137857179214137Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugal transfer protein TraA3e-1480.9
NC_015873:238187:2481432481432502002058Megasphaera elsdenii DSM 20460, complete genomemobA/MobL family protein2e-1378.2
NC_012796:1600600:1609788160978816126312844Desulfovibrio magneticus RS-1, complete genomeconjugal transfer protein TraA4e-0963.9
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-0862.4
NC_015977:2718437:2735594273559427373151722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein1e-0862.4
NC_010793:357000:3642693642693655851317Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA6e-0860.1
NC_010793:541040:5689105689105702081299Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA6e-0860.1
NC_015977:2920500:2926700292670029284211722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein9e-0859.3
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-0758.2
NC_010793:1695716:1704741170474117057571017Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA4e-0757
NC_007958:4371125:4378341437834143795851245Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein9e-0756.2