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Query: NC_014334:99000 Lactobacillus casei str. Zhang chromosome, complete genome

Start: 99000, End: 120290, Length: 21291

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus casei str. Zhang was isolated from traditional home-made koumiss (fermented mare's milk) in Inner Mongolia, China. This strain has the potential probiotic properties such as high resistance to acidic pH and bile salt. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008526:74500*7450011650442005Lactobacillus casei ATCC 334, complete genome017410BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_010999:2450974*2450974247597425001Lactobacillus casei, complete genome2e-41178BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome3e-24121BLASTN svgBLASTP svg
NC_008526:250000*25000027159921600Lactobacillus casei ATCC 334, complete genome3e-21111BLASTN svgBLASTP svg
NC_015634:3017564*3017564305008732524Bacillus coagulans 2-6 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007168:16431*164313433517905Staphylococcus haemolyticus JCSC1435, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004461:1*14406944069Staphylococcus epidermidis ATCC 12228, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002976:2580485*2580485260359923115Staphylococcus epidermidis RP62A, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010999:24830002483000250109918100Lactobacillus casei, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009004:1770497*1770497179533924843Lactococcus lactis subsp. cremoris MG1363, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013198:36829368295752920701Lactobacillus rhamnosus GG, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002758:16000*160003359917600Staphylococcus aureus subsp. aureus Mu50, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002951:15441*154413566720227Staphylococcus aureus subsp. aureus COL, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_002952:15405*154053571720313Staphylococcus aureus subsp. aureus MRSA252, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007793:15441*154413576920329Staphylococcus aureus subsp. aureus USA300, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007795:15414*154143645721044Staphylococcus aureus subsp. aureus NCTC 8325, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009782:16000*160003711021111Staphylococcus aureus subsp. aureus Mu3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010079:15441*154413576920329Staphylococcus aureus subsp. aureus USA300_TCH1516, complete6e-0763.9BLASTN svgBLASTP svg
NC_002745:16000*160003710921110Staphylococcus aureus subsp. aureus N315, complete genome6e-0763.9BLASTN svgBLASTP svg