Pre_GI: BLASTN Hits

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Query: NC_013929:6526745 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6526745, End: 6550939, Length: 24195

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003155:64445006444500646671722218Streptomyces avermitilis MA-4680, complete genome02407BLASTN svgBLASTP svg
NC_013595:4031947*4031947406329831352Streptosporangium roseum DSM 43021, complete genome8e-93349BLASTN svgBLASTP svg
NC_021177:71596547159654718278823135Streptomyces fulvissimus DSM 40593, complete genome5e-88333BLASTN svgBLASTP svg
NC_015957:27268162726816275123624421Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-88333BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_013169:1058463*1058463108536926907Kytococcus sedentarius DSM 20547, complete genome1e-39172BLASTN svgBLASTP svg
NC_013757:28583272858327287756419238Geodermatophilus obscurus DSM 43160, complete genome2e-38168BLASTN svgBLASTP svg
NC_004369:43759443759445872021127Corynebacterium efficiens YS-314, complete genome2e-32149BLASTN svgBLASTP svg
NC_007164:511171*51117153769026520Corynebacterium jeikeium K411, complete genome1e-30143BLASTN svgBLASTP svg
NC_003888:49271704927170497472347554Streptomyces coelicolor A3(2), complete genome6e-26127BLASTN svgBLASTP svg
NC_013441:27614592761459278449623038Gordonia bronchialis DSM 43247, complete genome2e-25125BLASTN svgBLASTP svg
NC_008578:1827605*1827605185916131557Acidothermus cellulolyticus 11B, complete genome2e-25125BLASTN svgBLASTP svg
NC_014814:54229725422972546967946708Mycobacterium sp. Spyr1 chromosome, complete genome9e-22113BLASTN svgBLASTP svg
NC_015953:25121522512152253676224611Streptomyces sp. SirexAA-E chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_009077:47744994774499480744932951Mycobacterium sp. JLS, complete genome8e-19103BLASTN svgBLASTP svg
NC_013521:10793710793712943721501Sanguibacter keddieii DSM 10542, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012489:65231965231969038838070Gemmatimonas aurantiaca T-27, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006087:24707082470708250154730840Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013722:2810721*2810721284465133931Xanthomonas albilineans, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005085:1096000*1096000111962323624Chromobacterium violaceum ATCC 12472, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_019974:1909244*1909244194059931356Natronococcus occultus SP4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018750:4728870*4728870475950630637Streptomyces venezuelae ATCC 10712, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014039:23863472386347240678020434Propionibacterium acnes SK137 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013510:74704274704277346526424Thermomonospora curvata DSM 43183, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015563:47734154773415479788824474Delftia sp. Cs1-4 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013947:5431741*5431741545589424154Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg