Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3329236 Citrobacter rodentium ICC168, complete genome

Start: 3329236, End: 3329976, Length: 741

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1518113:153075615307561531493738Pseudomonas putida F1, complete genomeLmbE family protein6e-118423
NC_009512:3618055:361940836194083620142735Pseudomonas putida F1, complete genomeLmbE family protein2e-113408
NC_014974:1076565:108535210853521086062711Thermus scotoductus SA-01 chromosome, complete genomeLmbE family protein3e-54211
NC_014206:2971304:298243529824352983163729Geobacillus sp. C56-T3 chromosome, complete genomeLmbE family protein4e-46184
NC_015152:272500:276083276083276823741Spirochaeta sp. Buddy chromosome, complete genomeLmbE family protein5e-33141
NC_016002:3704006:371737637173763718071696Pseudogulbenkiania sp. NH8B, complete genomeGlcNAc-PI de-N-acetylase family protein4e-0962
NC_006177:324363:336993336993337724732Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein3e-0858.9
NC_013222:2308542:230972923097292310451723Robiginitalea biformata HTCC2501, complete genomeGlcNAc-PI de-N-acetylase family protein7e-0857.8
NC_007530:1459412:146689214668921467596705Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-0756.2
NC_005945:1459357:146684614668461467550705Bacillus anthracis str. Sterne, complete genomehypothetical protein2e-0756.2
NC_020409:1407857:142114714211471421929783Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein9e-0753.9
NC_000961:435489:451438451438452256819Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-0652.8
NC_016023:1501553:150608315060831506766684Bacillus coagulans 36D1 chromosome, complete genomeLmbE family protein6e-0651.2
NC_015634:2933712:295056029505602951243684Bacillus coagulans 2-6 chromosome, complete genomeLmbE family protein6e-0651.2