Pre_GI: BLASTP Hits

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Query: NC_013410:89811:91186 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 91186, End: 91893, Length: 708

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014008:3296708:329950432995043300265762Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeprotein of unknown function DUF884e-1994.7
NC_014935:1223817:124498212449821245746765Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein7e-1994
NC_009614:978506:994796994796995518723Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein9e-1890.5
NC_016077:998741:101725110172511018039789Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein4e-1685.1
NC_011566:4709672:471090047109004711637738Shewanella piezotolerans WP3, complete genomehypothetical protein5e-1684.7
NC_009614:1999130:200409520040952004799705Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein1e-1583.6
NC_009092:521519:533870533870534667798Shewanella loihica PV-4, complete genomeprotein of unknown function DUF883e-1582
NC_009615:2503465:250819525081952508917723Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein3e-1478.6
NC_012108:4454705:447318244731824473892711Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein5e-1477.8
NC_004663:3285526:330264733026473303348702Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein1e-1377
NC_011884:2422000:2429974242997424318631890Cyanothece sp. PCC 7425, complete genomeprotein of unknown function DUF881e-1376.6
NC_010655:854152:876739876739877494756Akkermansia muciniphila ATCC BAA-835, complete genomeprotein of unknown function DUF884e-1375.1
NC_007514:335085:352031352031352825795Chlorobium chlorochromatii CaD3, complete genomehypothetical protein2e-1272.4
NC_015422:2078618:209136720913672092086720Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-1272.4
NC_015580:293803:293803293803294567765Novosphingobium sp. PP1Y, complete genomehypothetical protein3e-1272
NC_000911:1191445:121418812141881214937750Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-1272
NC_017039:1192111:121326012132601214009750Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-1272
NC_017052:1192099:121324812132481213997750Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-1272
NC_017277:1192485:121300512130051213754750Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-1272
NC_012039:1399699:141980814198081420497690Campylobacter lari RM2100, complete genomehypothetical protein9e-1270.5
NC_000909:404961:423068423068423790723Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein3e-1168.9
NC_005791:1028500:104193910419391042586648Methanococcus maripaludis S2, complete genomehypothetical protein3e-1168.9
NC_013156:633475:635605635605636192588Methanocaldococcus fervens AG86, complete genomeprotein of unknown function DUF883e-1168.9
NC_013407:203539:206034206034206684651Methanocaldococcus vulcanius M7, complete genomeprotein of unknown function DUF882e-1168.9
NC_013887:1668913:168747216874721688080609Methanocaldococcus sp. FS406-22 chromosome, complete genomeprotein of unknown function DUF884e-1168.2
NC_012854:1:564356436431789Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,protein of unknown function DUF885e-1168.2
NC_015556:819503:828718828718829512795Pseudomonas fulva 12-X chromosome, complete genomeDomain of unknown function DUF885e-1168.2
NC_015847:1119666:113605311360531136700648Methanococcus maripaludis XI chromosome, complete genomehypothetical protein7e-1167.8
NC_016629:2784000:279106927910692791824756Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein6e-1167.8
NC_015724:166246:182202182202183029828Cupriavidus necator N-1 plasmid BB2p, complete sequencehypothetical protein7e-1167.4
NC_009637:302881:319123319123319770648Methanococcus maripaludis C7 chromosome, complete genomehypothetical protein4e-1065.1
NC_014122:726070:727576727576728097522Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function DUF884e-1065.1
NC_015556:2265940:229809422980942298885792Pseudomonas fulva 12-X chromosome, complete genomeDomain of unknown function DUF884e-1065.1
NC_009975:1500978:150400915040091504656648Methanococcus maripaludis C6, complete genomeprotein of unknown function DUF889e-1063.9
NC_009634:411599:428301428301428948648Methanococcus vannielii SB chromosome, complete genomehypothetical protein1e-0963.5
NC_009135:494949:498643498643499224582Methanococcus maripaludis C5, complete genomeprotein of unknown function DUF882e-0962.8
NC_016147:151224:174484174484175326843Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein3e-0962.4
NC_018876:2760000:277623927762392776835597Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein5e-0961.6
NC_017095:2058921:2076485207648520777801296Fervidobacterium pennivorans DSM 9078 chromosome, complete genomehypothetical protein1e-0860.1
NC_009659:1129066:113411011341101134820711Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein9e-0857.4
NC_015410:3093465:314075131407513141470720Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein9e-0857.4
NC_016010:1169850:118478711847871185587801Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein3e-0755.8
NC_003901:815389:816408816408817001594Methanosarcina mazei Go1, complete genomehypothetical protein2e-0755.8
NC_014002:1173561:117644011764401176949510Methanohalophilus mahii DSM 5219 chromosome, complete genomeprotein of unknown function DUF882e-0755.8
NC_010688:3030873:303843030384303039230801Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-0755.5
NC_006177:46745:530895308953883795Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein5e-0754.7
NC_003552:4714457:473877547387754739362588Methanosarcina acetivorans C2A, complete genomehypothetical protein8e-0754.3