Pre_GI Gene

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Host: NC_006177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006177:46745 Symbiobacterium thermophilum IAM 14863, complete genome

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46745483071563lysine 56-aminomutase alpha subunitQuickGO ontologyBLASTP
4830449041738lysine 56-aminomutase beta subunitQuickGO ontologyBLASTP
4930549784480RNA polymerase delta subunitQuickGO ontologyBLASTP
49916515411626CTP synthetaseQuickGO ontologyBLASTP
51693529581266hypothetical proteinBLASTP
5308953883795hypothetical proteinBLASTP
54262579333672putative middle wall protein precursorQuickGO ontologyBLASTP
58396617313336putative middle wall protein precursorQuickGO ontologyBLASTP
6209062602513putative transposase subunitQuickGO ontologyBLASTP
6268062946267hypothetical protein
6317163365195hypothetical protein
6352264148627hypothetical proteinBLASTP
6422964729501hypothetical proteinBLASTP
6488865106219putative transposase subunitQuickGO ontologyBLASTP
65303664271125transposase subunitQuickGO ontologyBLASTP
6643166712282putative transposase subunitQuickGO ontologyBLASTP
6675867186429putative transposase subunitQuickGO ontologyBLASTP
6731368284972putative transposaseQuickGO ontologyBLASTP
6828569121837hypothetical proteinBLASTP
6913669411276hypothetical protein
69911737863876putative middle wall protein precursorQuickGO ontologyBLASTP
73957778503894putative middle wall protein precursorQuickGO ontologyBLASTP