Pre_GI: BLASTP Hits

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Query: NC_012917:569856:578523 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 578523, End: 579746, Length: 1224

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:4499143:4507088450708845082541167Pseudomonas syringae pv. tomato str. DC3000, complete genomeabortive infection protein, internal deletion1e-35151
NC_019012:61360:8042180421817611341Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequencehypothetical protein2e-22107
NC_011369:4395773:4406025440602544072421218Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeabortive infection protein1e-1997.8
NC_014151:3663295:3674721367472136760071287Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein3e-1893.2
NC_007333:39579:5366353663550181356Thermobifida fusca YX, complete genomeconserved hypothetical protein with similarity to AbiLI: abortive phage resistance protein6e-1479
NC_020211:4598217:4607213460721346084901278Serratia marcescens WW4, complete genomeRloA protein5e-1479
NC_007952:3037590:3041522304152230427901269Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative phage resistance protein5e-1479
NC_015437:27325:6991569915711921278Selenomonas sputigena ATCC 35185 chromosome, complete genomehypothetical protein3e-1376.6
NC_004369:3082691:3096528309652830978231296Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-1274.7
NC_009614:978506:99920599920510004491245Bacteroides vulgatus ATCC 8482 chromosome, complete genomeATPase1e-1274.7
NC_015953:2349503:2380735238073523819971263Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein6e-1272.4
NC_009614:4528418:4542517454251745437881272Bacteroides vulgatus ATCC 8482 chromosome, complete genomeATPase involved in transport3e-1170.1
NC_004307:1108325:1119574111957411208931320Bifidobacterium longum NCC2705, complete genomehypothetical protein with similarity to AbiLI: abortive phage resistance protein4e-1169.3
NC_017221:1763914:1774248177424817752911044Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein5e-1168.9
NC_015977:2565922:2577628257762825788751248Roseburia hominis A2-183 chromosome, complete genomeabortive infection protein1e-1067.8
NC_014836:2527000:2540159254015925414211263Desulfurispirillum indicum S5 chromosome, complete genomeRloA protein5e-1065.9
NC_015160:4285542:4321171432117143224421272Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative abortive infection protein2e-0963.9
NC_014363:480049:5025175025175037071191Olsenella uli DSM 7084 chromosome, complete genomehypothetical protein1e-0758.2
NC_009614:4528418:4544796454479645461061311Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein2e-0757.4
NC_019968:1235500:1252664125266412538811218Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein3e-0757
NC_007492:1193626:1206066120606612074091344Pseudomonas fluorescens PfO-1, complete genomeATPase-like7e-0755.5
NC_015873:924392:9473809473809486001221Megasphaera elsdenii DSM 20460, complete genomehypothetical protein8e-0755.5