Pre_GI: BLASTP Hits

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Query: NC_012854:1:6529 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,

Start: 6529, End: 7896, Length: 1368

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015675:2247960:2251420225142022527721353Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein3e-122438
NC_007908:1252189:1271080127108012723991320Rhodoferax ferrireducens T118, complete genomehypothetical protein4e-1273.2
NC_014311:198542:2119622119622131401179Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-1272.4
NC_015684:362236:3703373703373715151179Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein2e-1170.9
NC_010622:249625:2623102623102634971188Burkholderia phymatum STM815 chromosome 1, complete sequencehypothetical protein8e-1168.9
NC_018866:1790564:1795951179595117976001650Dehalobacter sp. DCA chromosome, complete genomehypothetical protein1e-1068.2
NC_004463:1717890:1732093173209317335501458Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-1067.8
NC_019771:2461000:247208724720872472863777Anabaena cylindrica PCC 7122, complete genomeHNH endonuclease2e-1067.4
NC_009256:2725836:2740594274059427417871194Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein3e-1067
NC_010814:1441327:1465186146518614665171332Geobacter lovleyi SZ, complete genomehypothetical protein3e-1066.6
NC_017249:8483159:8494524849452484956901167Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-1065.9
NC_014931:724102:7500997500997514211323Variovorax paradoxus EPS chromosome, complete genomehypothetical protein8e-1065.5
NC_011146:3720658:3733981373398137354501470Geobacter bemidjiensis Bem, complete genomehypothetical protein1e-0965.1
NC_014828:1932971:1934720193472019364021683Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein1e-0964.7
NC_013959:1059004:1090954109095410922551302Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein5e-0962.8
NC_014973:3414459:3425089342508934265221434Geobacter sp. M18 chromosome, complete genomehypothetical protein2e-0860.8
NC_015945:1908895:1910780191078019119341155Muricauda ruestringensis DSM 13258 chromosome, complete genomehypothetical protein2e-0757.8
NC_009792:3245368:324859132485913249358768Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0757.4
NC_004547:1873390:1878819187881918801141296Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical plasmid protein4e-0653.1
NC_015410:3209954:3217953321795332194431491Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein5e-0652.8
NC_007951:2904644:2936663293666329379371275Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein8e-0652.4