Pre_GI Gene

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Host: NC_017249 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:8483159 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
84831598484025867hypothetical proteinBLASTP
84840098484845837hypothetical proteinBLASTP
84854938485729237hypothetical proteinBLASTP
84865688486750183hypothetical protein
848703984887661728ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
84887638489644882ABC transporter permeaseQuickGO ontologyBLASTP
84896418490603963ABC transporter permeaseQuickGO ontologyBLASTP
849060084922881689ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
849232184936881368nitrilotriacetate monooxygenaseQuickGO ontologyBLASTP
8494336849441176tRNA-IleQuickGO ontologyBLASTP
849452484956901167hypothetical proteinBLASTP
84959098496199291hypothetical protein
84962598496603345hypothetical protein
84966158496905291hypothetical protein
849691584995692655hypothetical proteinBLASTP
849956685009181353hypothetical protein
85012618501710450hypothetical proteinBLASTP
85022518503012762hypothetical proteinBLASTP
850300985048591851hypothetical proteinBLASTP
850485685089084053hypothetical proteinBLASTP