Pre_GI: BLASTP Hits

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Query: NC_012668:368305:398583 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 398583, End: 399632, Length: 1050

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:238580:2393652393652404141050Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0730
NC_002505:238569:2393542393542404031050Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completelipopolysaccharide biosynthesis protein, putative0730
NC_009457:2764972:2765757276575727668061050Vibrio cholerae O395 chromosome 2, complete sequencelipopolysaccharide biosynthesis protein0730
NC_012578:224559:2253442253442263931050Vibrio cholerae M66-2 chromosome I, complete sequenceputative lipopolysaccharide biosynthesis protein0730
NC_012582:272320:2731052731052741541050Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative lipopolysaccharide biosynthesis protein0730
NC_016445:2663837:2664622266462226656711050Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0730
NC_017270:220282:2223472223472233961050Vibrio cholerae LMA3984-4 chromosome chromosome I, completelipopolysaccharide biosynthesis protein, putative0728
NC_015633:413587:4211574211574221971041Vibrio anguillarum 775 chromosome chromosome I, complete sequenceLipopolysaccharide heptosyltransferase-14e-134478
NC_002932:221661:2362782362782376421365Chlorobium tepidum TLS, complete genomeheptosyltransferase3e-0963.2
NC_011296:909558:912444912444913442999Thermodesulfovibrio yellowstonii DSM 11347, complete genomelipopolysaccharide heptosyltransferase II6e-0858.5