Pre_GI: BLASTP Hits

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Query: NC_012667:931390:998735 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 998735, End: 998869, Length: 135

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017269:303500:305892305892306026135Vibrio cholerae LMA3984-4 chromosome II, complete sequencehypothetical protein1e-1788.6
NC_016945:370471:393368393368393502135Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-1684.7
NC_012583:361241:404836404836404970135Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein1e-1684.7
NC_012580:301500:317764317764317898135Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein1e-1684.7
NC_009456:787322:858972858972859106135Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-1684.7
NC_002506:370629:393549393549393683135Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-1684.7
NC_002506:370629:380926380926381066141Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein7e-1165.9
NC_009456:787322:899789899789899929141Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein7e-1165.9
NC_012583:361241:364013364013364153141Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein7e-1165.9
NC_016945:370471:380745380745380885141Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein7e-1165.9
NC_016945:324519:348417348417348551135Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-0857
NC_016446:49618:736667366673800135Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-0857
NC_012667:931390:101298710129871013121135Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein3e-0857
NC_012583:361241:391537391537391653117Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein8e-0855.8
NC_009456:787322:872289872289872405117Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein8e-0855.8
NC_002506:298868:318630318630318746117Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein8e-0855.8